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blastp: ignoring client and choosing incorrect defaults? #10
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aurreco-uga
changed the title
blastp: choosing incorrect defaults
blastp: ignoring client and choosing incorrect defaults?
Apr 3, 2022
The config in the DB is: {
"tool": "blastp",
"-outfmt": {
"type": 15
},
"-max_target_seqs": 100,
"-db": "//db/PlasmoDB/build-57/Pyoeliiyoelii17X/blast/Pyoeliiyoelii17XAnnotatedProteins",
"-word_size": 6,
"-gapopen": 11,
"-gapextend": 1,
"-matrix": "PAM250"
} This means either there is a bug in the translation of the input format to the internal format or there is a client issue. |
(from jamie) This fix both (1) disables the submit button and (2) prevents the form from being submitted by pressing “Enter” while dependent params are loading. (edited) |
This was referenced Apr 15, 2022
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from error emails
B6BFA154DFD985F41240B6CF5E156DE3
when the user changes the matrix to PAM250, we seem to ignore client values and select incorrect defaults for -gapopen":11,"-gapextend":1,
it ends in 500, error is clear to the user
LOGS
A secondary issue is that the logs show 200, all good????? (check with ellie)
VALIDATOR
2022/04/03 14:13:27 Input JSON: {"-outfmt":{"type":15},"-max_target_seqs":100,"-word_size":6,"-gapopen":11,"-gapextend":1,"-matrix":"PAM250"}
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