Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

psf z_galvo step extraction fails for 20190802 dataset #41

Open
VolkerH opened this issue Aug 12, 2019 · 1 comment
Open

psf z_galvo step extraction fails for 20190802 dataset #41

VolkerH opened this issue Aug 12, 2019 · 1 comment
Labels
bug Something isn't working

Comments

@VolkerH
Copy link
Owner

VolkerH commented Aug 12, 2019

something about the PSF metadata appears to be malformed in this particular dataset. which causes PSF generation to crash when trying to deconvolve.
TODO: catch exception and try to recover or at least provide useful error message
@VolkerH VolkerH added the bug Something isn't working label Aug 12, 2019
@VolkerH
Copy link
Owner Author

VolkerH commented Aug 12, 2019

problem is likely caused by files in TetraSpec folder which doens't follow naming convention used so far (i.e. folder named as wavelength)

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
bug Something isn't working
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@VolkerH