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Using flag options when scoring multiple SVs in parallel from bed file #14

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melnel000 opened this issue Dec 12, 2024 · 1 comment
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@melnel000
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melnel000 commented Dec 12, 2024

Thanks for a great tool!

When scoring multiple SVs in parallel using the following command:
bash phenosv/model/phenosv.sh 'path/to/sv/data.csv' 'folder/path/to/store/results' 4 'HP:0000707,HP:0007598'

are you able to add options such as --inference 'full' --noncoding 'tad'

@Karenxzr
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Hi @melnel000 , thanks for great suggestion! I just updated the phenosv.sh script. Now it allows the same arguments as in the phenosv.pywith an additional argument of --workers to set up the multiprocessing. Please let me know how it works.

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