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layout title date author categories tags comments archive
home
Accessions
2015-01-01
Jinliang Yang
tutorial
general
github
general
markdown
jekyll
rstats
servr
true
true

GBS Data Summary:

<script type="text/javascript"> // jsData function gvisDataTableID20a9ed7443d () { var data = new google.visualization.DataTable(); var datajson = [ [ "2010 Ames Lines", 2688, "Inbred", "yes" ], [ "Ames282", 288, "Inbred", "yes" ], [ "NAM", 6389, "RIL", "yes" ], [ "Old Maize Diversity", 960, "Inbred", "yes" ], [ "HZAU panel", 522, "Inbred", "yes" ] ]; data.addColumn('string','Population'); data.addColumn('number','Size'); data.addColumn('string','Type'); data.addColumn('string','GBS'); data.addRows(datajson); return(data); } // jsDrawChart function drawChartTableID20a9ed7443d() { var data = gvisDataTableID20a9ed7443d(); var options = {}; options["allowHtml"] = true; var dataFormat1 = new google.visualization.NumberFormat({pattern:"#,###"}); dataFormat1.format(data, 1); var chart = new google.visualization.Table( document.getElementById('TableID20a9ed7443d') ); chart.draw(data,options); } // jsDisplayChart (function() { var pkgs = window.__gvisPackages = window.__gvisPackages || []; var callbacks = window.__gvisCallbacks = window.__gvisCallbacks || []; var chartid = "table"; // Manually see if chartid is in pkgs (not all browsers support Array.indexOf) var i, newPackage = true; for (i = 0; newPackage && i < pkgs.length; i++) { if (pkgs[i] === chartid) newPackage = false; } if (newPackage) pkgs.push(chartid); // Add the drawChart function to the global list of callbacks callbacks.push(drawChartTableID20a9ed7443d); })(); function displayChartTableID20a9ed7443d() { var pkgs = window.__gvisPackages = window.__gvisPackages || []; var callbacks = window.__gvisCallbacks = window.__gvisCallbacks || []; window.clearTimeout(window.__gvisLoad); // The timeout is set to 100 because otherwise the container div we are // targeting might not be part of the document yet window.__gvisLoad = setTimeout(function() { var pkgCount = pkgs.length; google.load("visualization", "1", { packages:pkgs, callback: function() { if (pkgCount != pkgs.length) { // Race condition where another setTimeout call snuck in after us; if // that call added a package, we must not shift its callback return; } while (callbacks.length > 0) callbacks.shift()(); } }); }, 100); } // jsFooter </script> <script type="text/javascript" src="https://www.google.com/jsapi?callback=displayChartTableID20a9ed7443d"></script>

GRIN Germplasm

Total Number of Accessions in GRIN genebank: N=13,131

<script type="text/javascript"> // jsData function gvisDataGeoChartID20a91b0eceb0 () { var data = new google.visualization.DataTable(); var datajson = [ [ "Afghanistan", 21 ], [ "Albania", 6 ], [ "Algeria", 20 ], [ "Angola", 15 ], [ "Anguilla", 1 ], [ "Antigua and Barbuda Antigua", 9 ], [ "Argentina", 308 ], [ "Australia", 22 ], [ "Austria", 29 ], [ "Azerbaijan", 4 ], [ "Barbados", 8 ], [ "Belarus", 1 ], [ "Belize Toledo", 4 ], [ "Benin", 1 ], [ "Bhutan", 6 ], [ "Bolivia", 30 ], [ "Botswana", 2 ], [ "Brazil", 247 ], [ "Bulgaria", 37 ], [ "Burkina Faso", 171 ], [ "Burundi", 16 ], [ "Cambodia", 2 ], [ "Cameroon", 45 ], [ "Canada", 64 ], [ "Chad", 1 ], [ "Chile", 475 ], [ "China", 119 ], [ "Colombia", 1309 ], [ "Costa Rica", 33 ], [ "Croatia", 26 ], [ "Cuba", 88 ], [ "Czechoslovakia", 12 ], [ "Dominican Republic", 99 ], [ "Ecuador", 7 ], [ "Egypt", 7 ], [ "El Salvador", 10 ], [ "Eritrea", 4 ], [ "Ethiopia", 145 ], [ "Former Serbia and Montenegro", 243 ], [ "France", 22 ], [ "French Guiana", 2 ], [ "Georgia", 6 ], [ "Germany", 7 ], [ "Grenada", 13 ], [ "Guadeloupe", 11 ], [ "Guatemala", 114 ], [ "Guinea", 117 ], [ "Guyana", 2 ], [ "Haiti", 25 ], [ "Honduras", 19 ], [ "Hungary", 92 ], [ "India", 36 ], [ "Indonesia", 5 ], [ "Iran", 5 ], [ "Iraq", 2 ], [ "Israel", 22 ], [ "Italy", 83 ], [ "Jamaica", 6 ], [ "Japan", 58 ], [ "Jordan", 1 ], [ "Kazakhstan", 2 ], [ "Kenya", 35 ], [ "Lebanon", 9 ], [ "Macedonia", 96 ], [ "Madagascar", 8 ], [ "Mali", 13 ], [ "Martinique", 3 ], [ "Mauritius", 2 ], [ "Mexico", 2008 ], [ "Moldova", 4 ], [ "Morocco", 10 ], [ "Myanmar", 1 ], [ "Nepal", 33 ], [ "Netherlands", 13 ], [ "New Zealand North Island", 3 ], [ "Nicaragua", 19 ], [ "Nigeria", 35 ], [ "Oman", 21 ], [ "Pakistan", 34 ], [ "Panama", 23 ], [ "Paraguay", 15 ], [ "Peru", 1448 ], [ "Philippines", 13 ], [ "Poland", 42 ], [ "Portugal", 199 ], [ "Puerto Rico", 36 ], [ "Reunion", 6 ], [ "Romania", 56 ], [ "Russian Federation", 23 ], [ "Saudi Arabia", 5 ], [ "Seed", 1 ], [ "Serbia", 43 ], [ "South Africa", 109 ], [ "Soviet Union Caucasus", 110 ], [ "Spain", 58 ], [ "Sri Lanka", 1 ], [ "St. Lucia", 12 ], [ "Sudan", 3 ], [ "Suriname", 5 ], [ "Swaziland", 1 ], [ "Syria", 8 ], [ "Taiwan", 8 ], [ "Tajikistan", 1 ], [ "Tanzania", 6 ], [ "Thailand", 11 ], [ "Togo", 87 ], [ "Trinidad and Tobago Tobago", 17 ], [ "Turkey", 561 ], [ "U.S. Outlying Islands Jarvis Island", 1 ], [ "Uganda", 1 ], [ "Ukraine", 20 ], [ "United States", 2945 ], [ "United Kingdom England", 2 ], [ "Unknown", 5 ], [ "Uruguay", 350 ], [ "Uzbekistan", 3 ], [ "Venezuela", 19 ], [ "Vietnam", 1 ], [ "Virgin Islands (British)", 25 ], [ "Yemen", 3 ], [ "Zaire", 18 ], [ "Zambia", 152 ], [ "Zimbabwe", 26 ] ]; data.addColumn('string','c1'); data.addColumn('number','Freq'); data.addRows(datajson); return(data); } // jsDrawChart function drawChartGeoChartID20a91b0eceb0() { var data = gvisDataGeoChartID20a91b0eceb0(); var options = {}; options["width"] = 556; options["height"] = 347; options["projection"] = "kavrayskiy-vii"; var chart = new google.visualization.GeoChart( document.getElementById('GeoChartID20a91b0eceb0') ); chart.draw(data,options); } // jsDisplayChart (function() { var pkgs = window.__gvisPackages = window.__gvisPackages || []; var callbacks = window.__gvisCallbacks = window.__gvisCallbacks || []; var chartid = "geochart"; // Manually see if chartid is in pkgs (not all browsers support Array.indexOf) var i, newPackage = true; for (i = 0; newPackage && i < pkgs.length; i++) { if (pkgs[i] === chartid) newPackage = false; } if (newPackage) pkgs.push(chartid); // Add the drawChart function to the global list of callbacks callbacks.push(drawChartGeoChartID20a91b0eceb0); })(); function displayChartGeoChartID20a91b0eceb0() { var pkgs = window.__gvisPackages = window.__gvisPackages || []; var callbacks = window.__gvisCallbacks = window.__gvisCallbacks || []; window.clearTimeout(window.__gvisLoad); // The timeout is set to 100 because otherwise the container div we are // targeting might not be part of the document yet window.__gvisLoad = setTimeout(function() { var pkgCount = pkgs.length; google.load("visualization", "1", { packages:pkgs, callback: function() { if (pkgCount != pkgs.length) { // Race condition where another setTimeout call snuck in after us; if // that call added a package, we must not shift its callback return; } while (callbacks.length > 0) callbacks.shift()(); } }); }, 100); } // jsFooter </script> <script type="text/javascript" src="https://www.google.com/jsapi?callback=displayChartGeoChartID20a91b0eceb0"></script>

Data summary

<script type="text/javascript"> // jsData function gvisDataColumnChartID20a91e7396bd () { var data = new google.visualization.DataTable(); var datajson = [ [ "WGS", 10, 20, 1 ], [ "GBS", 13, 26, 2 ], [ "SNP-Chip", 14, 28, 3 ], [ "RNA-seq", 10, 20, 1 ], [ "ChIP-seq", 13, 26, 2 ], [ "MNase", 14, 28, 3 ] ]; data.addColumn('string','country'); data.addColumn('number','Geno'); data.addColumn('number','Size'); data.addColumn('number','Study'); data.addRows(datajson); return(data); } // jsDrawChart function drawChartColumnChartID20a91e7396bd() { var data = gvisDataColumnChartID20a91e7396bd(); var options = {}; options["allowHtml"] = true; var chart = new google.visualization.ColumnChart( document.getElementById('ColumnChartID20a91e7396bd') ); chart.draw(data,options); } // jsDisplayChart (function() { var pkgs = window.__gvisPackages = window.__gvisPackages || []; var callbacks = window.__gvisCallbacks = window.__gvisCallbacks || []; var chartid = "corechart"; // Manually see if chartid is in pkgs (not all browsers support Array.indexOf) var i, newPackage = true; for (i = 0; newPackage && i < pkgs.length; i++) { if (pkgs[i] === chartid) newPackage = false; } if (newPackage) pkgs.push(chartid); // Add the drawChart function to the global list of callbacks callbacks.push(drawChartColumnChartID20a91e7396bd); })(); function displayChartColumnChartID20a91e7396bd() { var pkgs = window.__gvisPackages = window.__gvisPackages || []; var callbacks = window.__gvisCallbacks = window.__gvisCallbacks || []; window.clearTimeout(window.__gvisLoad); // The timeout is set to 100 because otherwise the container div we are // targeting might not be part of the document yet window.__gvisLoad = setTimeout(function() { var pkgCount = pkgs.length; google.load("visualization", "1", { packages:pkgs, callback: function() { if (pkgCount != pkgs.length) { // Race condition where another setTimeout call snuck in after us; if // that call added a package, we must not shift its callback return; } while (callbacks.length > 0) callbacks.shift()(); } }); }, 100); } // jsFooter </script> <script type="text/javascript" src="https://www.google.com/jsapi?callback=displayChartColumnChartID20a91e7396bd"></script>

Mapping Populations