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I created a module for TDC that makes a knowledge graph object – mims-harvard/TDC#207. So, pyPAGE results can be used to make gene-pathway graph and saved in TDC-KG object. Then, there are methods implemented to convert them into igraph / networkx objects. From a biology point of view, the network / graph representation compatible with these tools can enable other type of graph analysis from pypage results.
The text was updated successfully, but these errors were encountered:
related to goodarzilab/pypage#30
I created a module for TDC that makes a knowledge graph object – mims-harvard/TDC#207. So, pyPAGE results can be used to make gene-pathway graph and saved in TDC-KG object. Then, there are methods implemented to convert them into igraph / networkx objects. From a biology point of view, the network / graph representation compatible with these tools can enable other type of graph analysis from pypage results.
The text was updated successfully, but these errors were encountered: