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Hi, I accidentally used a gene_sequences.fasta (GS) file instead of a whole_genome_sequences.fasta (WGS) file as the reference genome when running Quast.
I am curious why the # mismatches of my_assembly aligned to WGS file is less than the # mismatches of my_assembly aligned to GS file.
Is this result rational due to some of the settings or is the GS file can't be used in this way?
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Hi, I accidentally used a gene_sequences.fasta (GS) file instead of a whole_genome_sequences.fasta (WGS) file as the reference genome when running Quast.
I am curious why the # mismatches of my_assembly aligned to WGS file is less than the # mismatches of my_assembly aligned to GS file.
Is this result rational due to some of the settings or is the GS file can't be used in this way?
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