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eda-report.Rmd
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eda-report.Rmd
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---
title: "EDA Report"
author: "Aleksandr Blekh"
output:
pdf_document:
highlight: kate
keep_tex: yes
number_sections: yes
toc: yes
toc_depth: 3
#lib_dir: figures/eda-report
includes:
in_header: ~/diss-floss/config/diss-floss.sty
md_document:
toc: yes
toc_depth: 3
html_document:
css: ~/diss-floss/config/knitr/markdown.css
number_sections: yes
theme: united
toc: yes
word_document:
fig_width: 6.5
mainfont: Calibri
---
The following report is dynamically generated and presents results of exploratory data analysis (EDA) for prepared (transformed) research data, located in directories under "data/transform".
This EDA consists of performing both descriptive and visual exploratory analysis for single variables (univariate), as well as for relationships between variables (multivariate).
```{r KnitrSetup, child='../config/knitr/knitr-setup-global.Rmd'}
# empty
```
```{r ReadChunksEDA}
read_chunk('eda.R')
```
```{r CleanEnv}
# empty
```
```{r ConfigReport}
param1 <- TRUE
param2 <- FALSE
param3 <- 'TEST'
```
```{r LoadPackages}
# empty
```
```{r PrepareEDA}
# empty
```
```{r CustomFunctions}
# empty
```
```{r PerformEDA, cache=TRUE}
# empty
```
The SourceForge pilot data set consists of `r length(dir(file.path(TRANSFORM_DIR, "SourceForge")))` indicators. The following is the summary descriptive statistics of the data set.
```{r edaReportSummary, include=TRUE, fig.cap='EDA Report'}
print(describe_flossData)
```
And now let's see what output would be produced by 'xtable' package:
```{r edaReportSummary2, include=TRUE, results='asis', fig.cap='EDA Report'}
print(genEDAdescStatTable(flossData))
#print(xtable(describe_flossData, caption="flossData Summary",
# digits=3),
# comment = FALSE,
# include.rownames = FALSE)
```