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CHANGELOG.rst

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Change Log

Version History

0.2.0
  • Remove unused RankingsDatabase classes and conversion functions.
  • Add CisTargetDatabase class for reading rankings/scores for regions/genes from a cisTarget scores or rankings database (only Feather v2 format), which requires pyarrow >= 8.0.0 instead of <=0.17.1 needed for the old FeatherRankingDatabase class.
  • Update FeatherRankingDatabase to use CisTargetDatabase to read cisTarget databases.
  • Reformat code and update type annotations.
0.1.1
  • Add support for reading rankings databases created by create_cisTarget_databases as the index column in the Feather file is "motifs" or "tracks" instead of "features".
0.1.0
  • Project created.