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Hi!
I was following the tutorial for 10X scRNA data given. All the steps ran perfectly uptil the following snippet: annotation <- generateAnnotation(id_type="hgnc_symbol", genes=genes, centromere=centromere, ishg19 = T)
Which constantly returns the error: Batch submitting query [=========================================================>-------------------] 75% eta: 4sError in curl::curl_fetch_memory(url, handle = handle) : transfer closed with outstanding read data remaining
Upon a cursory read, it seems that this occurs when the data is incomplete and hence curl stops procuring it. In most cases where people obtained errors like this, it was resolved by using http or changing the wait time. That would require me to go through and modify CaSpER, which I am not comfortable with.
Are there any other ways to resolve this perhaps?
PS. All my packages are up to date
The text was updated successfully, but these errors were encountered:
Hi!
I was following the tutorial for 10X scRNA data given. All the steps ran perfectly uptil the following snippet:
annotation <- generateAnnotation(id_type="hgnc_symbol", genes=genes, centromere=centromere, ishg19 = T)
Which constantly returns the error:
Batch submitting query [=========================================================>-------------------] 75% eta: 4sError in curl::curl_fetch_memory(url, handle = handle) : transfer closed with outstanding read data remaining
Upon a cursory read, it seems that this occurs when the data is incomplete and hence curl stops procuring it. In most cases where people obtained errors like this, it was resolved by using http or changing the wait time. That would require me to go through and modify CaSpER, which I am not comfortable with.
Are there any other ways to resolve this perhaps?
PS. All my packages are up to date
The text was updated successfully, but these errors were encountered: