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Scaling process of registering tables #64

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crangelsmith opened this issue Oct 30, 2020 · 0 comments
Open

Scaling process of registering tables #64

crangelsmith opened this issue Oct 30, 2020 · 0 comments
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enhancement New feature or request

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@crangelsmith
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The largest bottle neck on running the simulation is the initial setup where all the rate tables are registered into the simulation state. This seems to take a long time (around 20 min per table), around 2 hours in total on the full pipeline.

A good investment of time could be in investigate how to speed this up (currently this library uses methods from the base vivarium library for this step).
@crangelsmith crangelsmith added the enhancement New feature or request label Oct 30, 2020
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@crangelsmith