README.md

A tools collection for MHD/RAW files

Dependencies

Python packages:

• click
• SimpleITK
• scipy
• numpy
• matplotlib==3.5.2

Installation

A python virtual environment is advised:

# move somewhere you want your environment to be
python -m venv mhdtools
source mhdtools/bin/activate
pip install -U pip
pip install click SimpleITK scipy numpy matplotlib==3.5.2

Helper script

To avoid having to source the python environment manually, one can write this helper script:

#!/usr/bin/bash

source /path/to/mhdtools/bin/activate
/path/to/mhdview "$@"

To do:

• name the script below mhdview
• adapt paths to your installation (env and mhdview)