Error while running the code

[ammaarahmad1999]

I have recieved the following error while running on pretrained model.
No module named allennlp.run
I don't know the reason. I am working on conda environment. And have already installed allennlp
I have used following command to run
allennlp ./scicite.tar.gz ./scicite_data/test.jsonl --predictor predcitor_scicite --include-package scicite --overrides "{'model':{'data_format':''}}"

[ammaarahmad1999]

Last issues are solved but I am getting another error while running
Command: python -m allennlp predict ./scicite.tar.gz ./scicite_data/test.jsonl --predictor predictor_scicite --include-package scicite --overrides "{'model':{'data_format':'predictor_scicite'}}"

Error: from allennlp.data.dataset import Batch
ModuleNotFoundError: No module named 'allennlp.data.dataset'

[ygorg]

I'm adding here the steps I followed to successfully run the code in hope that it will help someone.

virtualenv env -p python3.7
source env/bin/activate
pip install allennlp==0.9 overrides==3.1.0 jsonlines python-levenshtein
# I didn't see that "constraints.txt" listed dependencies ...

# from scicite root
allennlp predict scicite.tar.gz path/to/my_data.jsonl --predictor predictor_scicite --include-package scicite --overrides "{'model':{'data_format':'', 'predict_mode': true}}" --output-file out.jsonl

# from anywhere else add "path/to/scicite" to PYTHONPATH
PYTHONPATH="path/to/scicite" allennlp predict "path/to/scicite/scicite.tar.gz" "path/to/my_data.jsonl" --predictor predictor_scicite --include-package scicite --overrides "{'model':{'data_format':'', 'predict_mode': true}}" --output-file out.jsonl

The data should look like this:

{
  "string": "the citation string",
  "citingPaperId": "0000", "citedPaperId": "0001",
  "excerpt_index": "0",
  "label": null, "sectionName": null
}

The ids and excerpt_index are metadata, the values do not affect the model. It seem like adding a sectionName will do something else see here ?
For the citation string, the citations markers are removed by this regex.

[Martin36]

I get another error when running:

TypeError: ArrayField.empty_field: return type `None` is not a `allennlp.data.fields.field.Field`.

I am running it with:

allennlp predict scicite.tar.gz data/scicite/dev.jsonl --predictor predictor_scicite --include-package scicite --overrides "{'model':{'data_format':'', 'predict_mode': true}}" --output-file out.jsonl

in a Conda env with Python version 3.6 and installed the packages following the guide in the README

[Martin36]

I got it working by installing the pip package mentioned here: allenai/specter#27 (comment)

pip install overrides==3.1.0