capcalc_singularity

#!/usr/bin/env python
# -*- coding: latin-1 -*-
#
#   Copyright 2016-2019 Blaise Frederick
#
#   Licensed under the Apache License, Version 2.0 (the "License");
#   you may not use this file except in compliance with the License.
#   You may obtain a copy of the License at
#
#       http://www.apache.org/licenses/LICENSE-2.0
#
#   Unless required by applicable law or agreed to in writing, software
#   distributed under the License is distributed on an "AS IS" BASIS,
#   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
#   See the License for the specific language governing permissions and
#   limitations under the License.
#
#
# $Author: frederic $
# $Date: 2016/07/11 14:50:43 $
#       $Id: resamp1tc,v 1.12 2016/07/11 14:50:43 frederic Exp $
#

import subprocess
import sys


def main():
    # get the command line parameters
    thecapcalccmd = sys.argv[1:]
    thewrappercmd = [
        "singularity",
        "run",
        "--cleanenv",
        "-B",
        "/Users/frederic:/data",
        "capcalc_latest.sif",
    ]
    subprocess.call(thewrappercmd + thecapcalccmd)


if __name__ == "__main__":
    main()