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utils.py
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utils.py
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import numpy as np
import torchvision.utils as vutils
import torch, random
import torch.nn.functional as F
# print arguments
def print_args(args):
print("################################ args ################################")
for k, v in args.__dict__.items():
print("{0: <10}\t{1: <30}\t{2: <20}".format(k, str(v), str(type(v))))
print("########################################################################")
# torch.no_grad warpper for functions
def make_nograd_func(func):
def wrapper(*f_args, **f_kwargs):
with torch.no_grad():
ret = func(*f_args, **f_kwargs)
return ret
return wrapper
# convert a function into recursive style to handle nested dict/list/tuple variables
def make_recursive_func(func):
def wrapper(vars):
if isinstance(vars, list):
return [wrapper(x) for x in vars]
elif isinstance(vars, tuple):
return tuple([wrapper(x) for x in vars])
elif isinstance(vars, dict):
return {k: wrapper(v) for k, v in vars.items()}
else:
return func(vars)
return wrapper
@make_recursive_func
def tensor2float(vars):
if isinstance(vars, float):
return vars
elif isinstance(vars, torch.Tensor):
return vars.data.item()
else:
raise NotImplementedError("invalid input type {} for tensor2float".format(type(vars)))
@make_recursive_func
def tensor2numpy(vars):
if isinstance(vars, np.ndarray):
return vars
elif isinstance(vars, torch.Tensor):
return vars.detach().cpu().numpy().copy()
else:
raise NotImplementedError("invalid input type {} for tensor2numpy".format(type(vars)))
@make_recursive_func
def tocuda(vars):
if isinstance(vars, torch.Tensor):
return vars.to(torch.device("cuda"))
elif isinstance(vars, str):
return vars
else:
raise NotImplementedError("invalid input type {} for tensor2numpy".format(type(vars)))
def save_scalars(logger, mode, scalar_dict, global_step):
scalar_dict = tensor2float(scalar_dict)
for key, value in scalar_dict.items():
if not isinstance(value, (list, tuple)):
name = '{}/{}'.format(mode, key)
logger.add_scalar(name, value, global_step)
else:
for idx in range(len(value)):
name = '{}/{}_{}'.format(mode, key, idx)
logger.add_scalar(name, value[idx], global_step)
def save_images(logger, mode, images_dict, global_step):
images_dict = tensor2numpy(images_dict)
def preprocess(name, img):
if not (len(img.shape) == 3 or len(img.shape) == 4):
raise NotImplementedError("invalid img shape {}:{} in save_images".format(name, img.shape))
if len(img.shape) == 3:
img = img[:, np.newaxis, :, :]
img = torch.from_numpy(img[:1])
return vutils.make_grid(img, padding=0, nrow=1, normalize=True, scale_each=True)
for key, value in images_dict.items():
if not isinstance(value, (list, tuple)):
name = '{}/{}'.format(mode, key)
logger.add_image(name, preprocess(name, value), global_step)
else:
for idx in range(len(value)):
name = '{}/{}_{}'.format(mode, key, idx)
logger.add_image(name, preprocess(name, value[idx]), global_step)
class DictAverageMeter(object):
def __init__(self):
self.data = {}
self.count = 0
def update(self, new_input):
self.count += 1
if len(self.data) == 0:
for k, v in new_input.items():
if not isinstance(v, float):
raise NotImplementedError("invalid data {}: {}".format(k, type(v)))
self.data[k] = v
else:
for k, v in new_input.items():
if not isinstance(v, float):
raise NotImplementedError("invalid data {}: {}".format(k, type(v)))
self.data[k] += v
def mean(self):
return {k: v / self.count for k, v in self.data.items()}
# a wrapper to compute metrics for each image individually
def compute_metrics_for_each_image(metric_func):
def wrapper(depth_est, depth_gt, mask, *args):
batch_size = depth_gt.shape[0]
results = []
# compute result one by one
for idx in range(batch_size):
ret = metric_func(depth_est[idx], depth_gt[idx], mask[idx], *args)
results.append(ret)
return torch.stack(results).mean()
return wrapper
@make_nograd_func
@compute_metrics_for_each_image
def Thres_metrics(depth_est, depth_gt, mask, thres):
assert isinstance(thres, (int, float))
depth_est_mask, depth_gt_mask = depth_est[mask], depth_gt[mask]
errors = torch.abs(depth_est_mask - depth_gt_mask)
# return errors
err_mask = errors > thres
return torch.mean(err_mask.float())
# NOTE: please do not use this to build up training loss
@make_nograd_func
@compute_metrics_for_each_image
def AbsDepthError_metrics(depth_est, depth_gt, mask, thres=None):
depth_est, depth_gt = depth_est[mask], depth_gt[mask]
error = (depth_est - depth_gt).abs()
if thres is not None:
error = error[(error >= float(thres[0])) & (error <= float(thres[1]))]
if error.shape[0] == 0:
return torch.tensor(0, device=error.device, dtype=error.dtype)
return torch.mean(error)
import torch.distributed as dist
def synchronize():
"""
Helper function to synchronize (barrier) among all processes when
using distributed training
"""
if not dist.is_available():
return
if not dist.is_initialized():
return
world_size = dist.get_world_size()
if world_size == 1:
return
dist.barrier()
def get_world_size():
if not dist.is_available():
return 1
if not dist.is_initialized():
return 1
return dist.get_world_size()
def reduce_scalar_outputs(scalar_outputs):
world_size = get_world_size()
if world_size < 2:
return scalar_outputs
with torch.no_grad():
names = []
scalars = []
for k in sorted(scalar_outputs.keys()):
names.append(k)
scalars.append(scalar_outputs[k])
scalars = torch.stack(scalars, dim=0)
dist.reduce(scalars, dst=0)
if dist.get_rank() == 0:
# only main process gets accumulated, so only divide by
# world_size in this case
scalars /= world_size
reduced_scalars = {k: v for k, v in zip(names, scalars)}
return reduced_scalars
def check_shape_for_metric_computation(*vars):
assert isinstance(vars, tuple)
for var in vars:
assert len(var.size()) == 3
assert var.size() == vars[0].size()
# a wrapper to compute metrics for each image individually
def compute_metric_for_each_image(metric_func):
def wrapper(D_ests, D_gts, masks, *nargs):
check_shape_for_metric_computation(D_ests, D_gts, masks)
bn = D_gts.shape[0] # batch size
results = [] # a list to store results for each image
# compute result one by one
for idx in range(bn):
# if tensor, then pick idx, else pass the same value
cur_nargs = [x[idx] if isinstance(x, (Tensor, Variable)) else x for x in nargs]
if masks[idx].float().mean() / (D_gts[idx] > 0).float().mean() < 0.1:
# print("masks[idx].float().mean() too small, skip")
pass
else:
ret = metric_func(D_ests[idx], D_gts[idx], masks[idx], *cur_nargs)
results.append(ret)
if len(results) == 0:
print("masks[idx].float().mean() too small for all images in this batch, return 0")
return torch.tensor(0, dtype=torch.float32, device=D_gts.device)
else:
return torch.stack(results).mean()
return wrapper
@make_nograd_func
@compute_metric_for_each_image
def D1_metric(D_est, D_gt, mask):
D_est, D_gt = D_est[mask], D_gt[mask]
E = torch.abs(D_gt - D_est)
err_mask = (E > 3) & (E / D_gt.abs() > 0.05)
return torch.mean(err_mask.float())
@make_nograd_func
@compute_metric_for_each_image
def Thres_metric(D_est, D_gt, mask, thres):
assert isinstance(thres, (int, float))
D_est, D_gt = D_est[mask], D_gt[mask]
E = torch.abs(D_gt - D_est)
err_mask = E > thres
return torch.mean(err_mask.float())
# NOTE: please do not use this to build up training loss
@make_nograd_func
@compute_metric_for_each_image
def EPE_metric(D_est, D_gt, mask):
D_est, D_gt = D_est[mask], D_gt[mask]
return F.l1_loss(D_est, D_gt, reduction='mean')
import torch
from bisect import bisect_right
# FIXME ideally this would be achieved with a CombinedLRScheduler,
# separating MultiStepLR with WarmupLR
# but the current LRScheduler design doesn't allow it
class WarmupMultiStepLR(torch.optim.lr_scheduler._LRScheduler):
def __init__(
self,
optimizer,
milestones,
gamma=0.1,
warmup_factor=1.0 / 3,
warmup_iters=500,
warmup_method="linear",
last_epoch=-1,
):
if not list(milestones) == sorted(milestones):
raise ValueError(
"Milestones should be a list of" " increasing integers. Got {}",
milestones,
)
if warmup_method not in ("constant", "linear"):
raise ValueError(
"Only 'constant' or 'linear' warmup_method accepted"
"got {}".format(warmup_method)
)
self.milestones = milestones
self.gamma = gamma
self.warmup_factor = warmup_factor
self.warmup_iters = warmup_iters
self.warmup_method = warmup_method
super(WarmupMultiStepLR, self).__init__(optimizer, last_epoch)
def get_lr(self):
warmup_factor = 1
if self.last_epoch < self.warmup_iters:
if self.warmup_method == "constant":
warmup_factor = self.warmup_factor
elif self.warmup_method == "linear":
alpha = float(self.last_epoch) / self.warmup_iters
warmup_factor = self.warmup_factor * (1 - alpha) + alpha
#print("base_lr {}, warmup_factor {}, self.gamma {}, self.milesotnes {}, self.last_epoch{}".format(
# self.base_lrs[0], warmup_factor, self.gamma, self.milestones, self.last_epoch))
return [
base_lr
* warmup_factor
* self.gamma ** bisect_right(self.milestones, self.last_epoch)
for base_lr in self.base_lrs
]
def set_random_seed(seed):
random.seed(seed)
np.random.seed(seed)
torch.manual_seed(seed)
torch.cuda.manual_seed_all(seed)
def local_pcd(depth, intr):
nx = depth.shape[1] # w
ny = depth.shape[0] # h
x, y = np.meshgrid(np.arange(nx), np.arange(ny), indexing='xy')
x = x.reshape(nx * ny)
y = y.reshape(nx * ny)
p2d = np.array([x, y, np.ones_like(y)])
p3d = np.matmul(np.linalg.inv(intr), p2d)
depth = depth.reshape(1, nx * ny)
p3d *= depth
p3d = np.transpose(p3d, (1, 0))
p3d = p3d.reshape(ny, nx, 3).astype(np.float32)
return p3d
def generate_pointcloud(rgb, depth, ply_file, intr, scale=1.0):
"""
Generate a colored point cloud in PLY format from a color and a depth image.
Input:
rgb_file -- filename of color image
depth_file -- filename of depth image
ply_file -- filename of ply file
"""
fx, fy, cx, cy = intr[0, 0], intr[1, 1], intr[0, 2], intr[1, 2]
points = []
for v in range(rgb.shape[0]):
for u in range(rgb.shape[1]):
color = rgb[v, u] #rgb.getpixel((u, v))
Z = depth[v, u] / scale
if Z == 0: continue
X = (u - cx) * Z / fx
Y = (v - cy) * Z / fy
points.append("%f %f %f %d %d %d 0\n" % (X, Y, Z, color[0], color[1], color[2]))
file = open(ply_file, "w")
file.write('''ply
format ascii 1.0
element vertex %d
property float x
property float y
property float z
property uchar red
property uchar green
property uchar blue
property uchar alpha
end_header
%s
''' % (len(points), "".join(points)))
file.close()
print("save ply, fx:{}, fy:{}, cx:{}, cy:{}".format(fx, fy, cx, cy))
def trunc_normal_(tensor, mean=0., std=1., a=-2., b=2.):
# type: (Tensor, float, float, float, float) -> Tensor
return _no_grad_trunc_normal_(tensor, mean, std, a, b)
def torch_init_model(model, total_dict, key, rank=0):
if key in total_dict:
state_dict = total_dict[key]
else:
state_dict = total_dict
missing_keys = []
unexpected_keys = []
error_msgs = []
# copy state_dict so _load_from_state_dict can modify it
metadata = getattr(state_dict, '_metadata', None)
state_dict = state_dict.copy()
if metadata is not None:
state_dict._metadata = metadata
def load(module, prefix=''):
local_metadata = {} if metadata is None else metadata.get(prefix[:-1], {})
module._load_from_state_dict(state_dict=state_dict, prefix=prefix, local_metadata=local_metadata, strict=True,
missing_keys=missing_keys, unexpected_keys=unexpected_keys, error_msgs=error_msgs)
for name, child in module._modules.items():
if child is not None:
load(child, prefix + name + '.')
load(model, prefix='')
if rank == 0:
print("missing keys:{}".format(missing_keys))
print('unexpected keys:{}'.format(unexpected_keys))
print('error msgs:{}'.format(error_msgs))