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a diagonal hessian that works for 3 tip tree BEAST CI #1056: Commit a67b22d pushed by xji3
December 18, 2023 21:02 9m 25s hmc-clock
hmc-clock
December 18, 2023 21:02 9m 25s
Merge branch 'hmc-clock' of https://github.com/beast-dev/beast-mcmc i… BEAST CI #1055: Commit 990985d pushed by xji3
December 18, 2023 20:32 9m 16s hmc-clock
hmc-clock
December 18, 2023 20:32 9m 16s
fix determinant calculation BEAST CI #1054: Commit fd2a747 pushed by msuchard
December 17, 2023 14:38 9m 15s hmc-clock
hmc-clock
December 17, 2023 14:38 9m 15s
move calculations wrt lambda out of constant terms BEAST CI #1053: Commit db1fa38 pushed by msuchard
December 17, 2023 13:54 9m 21s hmc-clock
hmc-clock
December 17, 2023 13:54 9m 21s
intermediate work on FrequencyModelGradient BEAST CI #1052: Commit 3263d62 pushed by msuchard
December 16, 2023 20:55 9m 11s hmc-clock
hmc-clock
December 16, 2023 20:55 9m 11s
clean out dense operations from GMRF class; rename start --> mean BEAST CI #1051: Commit f47461b pushed by msuchard
December 16, 2023 20:53 1m 0s hmc-clock
hmc-clock
December 16, 2023 20:53 1m 0s
Fix GMRF to work with lambda null BEAST CI #1050: Commit 8b14d64 pushed by PratyusaDatta
December 15, 2023 23:41 9m 11s hmc-clock
hmc-clock
December 15, 2023 23:41 9m 11s
Merge branch 'BigFastTreeModel' of https://github.com/beast-dev/beast… BEAST CI #1049: Commit 6920a78 pushed by jtmccr1
December 15, 2023 20:03 14m 30s BigFastTreeModel
BigFastTreeModel
December 15, 2023 20:03 14m 30s
When there is drift, try going back to using the internal node simula… BEAST CI #1048: Commit dab5926 pushed by pbastide
December 15, 2023 18:31 9m 14s integrated_OU_merge
integrated_OU_merge
December 15, 2023 18:31 9m 14s
Accessor for partials precision and variance BEAST CI #1047: Commit cf0a9ac pushed by pbastide
December 15, 2023 17:44 7m 0s integrated_OU_merge
integrated_OU_merge
December 15, 2023 17:44 7m 0s
re-enable skyglide tests so that GMRF can get fixed BEAST CI #1046: Commit 42e6fc3 pushed by msuchard
December 15, 2023 13:13 7m 3s hmc-clock
hmc-clock
December 15, 2023 13:13 7m 3s
remove gmrf gradient test from Skyglide test to make ci happy BEAST CI #1045: Commit d97a1fc pushed by xji3
December 15, 2023 00:05 9m 26s hmc-clock
hmc-clock
December 15, 2023 00:05 9m 26s
Merge branch 'hmc-clock' of github.com:beast-dev/beast-mcmc into hmc-… BEAST CI #1044: Commit bbda699 pushed by msuchard
December 14, 2023 23:39 4m 49s hmc-clock
hmc-clock
December 14, 2023 23:39 4m 49s
Merge branch 'hmc-clock' of https://github.com/beast-dev/beast-mcmc i… BEAST CI #1043: Commit 23d4b81 pushed by PratyusaDatta
December 14, 2023 20:07 4m 51s hmc-clock
hmc-clock
December 14, 2023 20:07 4m 51s
allow NewAntigenicLikelihood to use FastMatrixParameter BEAST CI #1042: Commit 913f15b pushed by msuchard
December 14, 2023 03:12 9m 15s hmc-clock
hmc-clock
December 14, 2023 03:12 9m 15s
infrastructure for coalescent gradient wrt parametric parameters BEAST CI #1041: Commit 837ffff pushed by msuchard
December 13, 2023 21:27 9m 22s hmc-clock
hmc-clock
December 13, 2023 21:27 9m 22s
better masking parsing BEAST CI #1040: Commit b6145ba pushed by msuchard
December 13, 2023 18:52 9m 15s hmc-clock
hmc-clock
December 13, 2023 18:52 9m 15s
Merge branch 'hmc-clock' of github.com:beast-dev/beast-mcmc into hmc-… BEAST CI #1039: Commit 1a1949c pushed by msuchard
December 13, 2023 18:05 9m 24s hmc-clock
hmc-clock
December 13, 2023 18:05 9m 24s
larger difference in test xml to avoid numeric instability more sever… BEAST CI #1038: Commit 12bbd6c pushed by xji3
December 13, 2023 17:35 9m 22s hmc-clock
hmc-clock
December 13, 2023 17:35 9m 22s
fix diagonal hessian calculation BEAST CI #1037: Commit 6adb443 pushed by xji3
December 13, 2023 17:33 4m 45s hmc-clock
hmc-clock
December 13, 2023 17:33 4m 45s
Merge branch 'hmc-clock' of https://github.com/beast-dev/beast-mcmc i… BEAST CI #1036: Commit 7fe5300 pushed by xji3
December 13, 2023 02:28 4m 55s hmc-clock
hmc-clock
December 13, 2023 02:28 4m 55s
fix bug in name matching for antigenic cartography BEAST CI #1035: Commit 36496e1 pushed by msuchard
December 12, 2023 22:07 9m 24s hmc-clock
hmc-clock
December 12, 2023 22:07 9m 24s
remove broken test-unit BEAST CI #1034: Commit 0112f9f pushed by msuchard
December 12, 2023 18:37 12m 7s BigFastTreeModel
BigFastTreeModel
December 12, 2023 18:37 12m 7s
manual merge of hmc-clock -- BigFastTreeModel BEAST CI #1033: Commit 6c017de pushed by msuchard
December 12, 2023 18:08 12m 19s BigFastTreeModel
BigFastTreeModel
December 12, 2023 18:08 12m 19s
Merge branch 'hmc-clock' of https://github.com/beast-dev/beast-mcmc i… BEAST CI #1032: Commit b299749 pushed by xji3
December 12, 2023 17:14 9m 26s hmc-clock
hmc-clock
December 12, 2023 17:14 9m 26s
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