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pubs.md~
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pubs.md~
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---
layout: page
title: Publications
author: benbfly
---
{% assign ordered_pubs = site.data.pubs | sort %}
{% assign full_pubs_scholar = "https://scholar.google.com/citations?user=GnZNoE4AAAAJ" %}
{% assign full_pubs_pubmed = "http://www.ncbi.nlm.nih.gov/pubmed?term=berman-bp&cmd=search" %}
<h4>
{{ ordered_pubs | size }} core papers selected from 57 peer-reviewed Berman lab publications. A complete list of publications is available at my <a target="_blank" href="{{full_pubs_scholar}}">Google Scholar page</a> or my <a target="_blank" href="{{full_pubs_pubmed}}">PubMed page</a>.
</h4>
<BR>
{% for pub_hash in ordered_pubs %}
{% assign pub = pub_hash[1] %}
{% if pub.type %}
{% comment %}
Zhou W, Dinh H, Ramjan Z, Weisenberger DJ, Nicolet CM, Shen H*, Laird PW*, Berman BP*. “DNA methylation loss in late-replicating domains is linked to mitotic cell divisions”. Nat. Genet., 2018 50(4);591-602.
{% endcomment %}
<div class="card text-white bg-primary mb-3" id="cite{{forloop.index}}">
<div class="card-body">
<p class="card-text" id="citetext{{forloop.index}}">
{{pub.author[0].family}}, {{pub.author[0].given}} et al. "{{pub.title}}". <em>{{pub.container-title}}</em>, <B>{{pub.issued.date-parts[0][0]}}</B>
doi:<a target="_blank" href="https://doi.org/{{pub.DOI}}">{{pub.DOI}}</a>
<span class="__dimensions_badge_embed__" id="badge{{forloop.index}}" data-doi="{{pub.DOI}}" data-style="small_rectangle"></span>
</p>
</div>
</div>
{% endif %}
{% endfor %}
{% comment %}
<!--------------- OLD ------------->
<!-- DOIs -->
{% assign dois = "10.1093/bioinformatics/bty902, 10.1038/S41588-018-0073-4, 10.1136/GUTJNL-2017-314607, 10.1161/CIRCULATIONAHA.116.024590, 10.1038/NG.3683, 10.1186/S13059-015-0668-3, 10.1101/GR.183368.114, 10.1101/GR.143008.112, 10.1186/GB-2012-13-7-R61" | split: ", " %}
<!-- Wikidata -->
{% assign wikiids = "Q58604702, Q52722157, Q38599134, Q38836140, Q37452434, Q35702332, Q35238256, Q36446228, Q34333346" | split: ", " %}
{% for pubid in pubids %}
{% comment %}
****Cite and opts are defined in head.html****
{% endcomment %}
{% comment %}
<div class="card text-white bg-primary mb-3">
<div class="card-body">
<div class="citation-js cite" data-input="Q21972834">This text can now be ignored</div>
</div>
</div>
{% endcomment %}
<div class="card text-white bg-primary mb-3">
<div class="card-body">
<p class="card-text" id="cite{{forloop.index}}"></p>
</div>
</div>
<script class="code">
Cite.async('{{pubid}}', function(example) {
htmlOutput = example.get(opt)
$('#cite{{forloop.index}}').html(htmlOutput)
{% comment %}
window.__dimensions_embed.addBadges()
{% endcomment %}
})
</script>
{% comment %}
<div class="card text-white bg-primary mb-3">
<div class="card-body">
<p class="card-text" id="{{pubid}}"></p>
</div>
</div>
<script class="code">
Cite.async('{{pubid}}', function(wikidata) {
htmlOutput = wikidata.get(opt)
$('#{{pubid}}').html(htmlOutput)
_altmetric_embed_init()
})
</script>
{% endcomment %}
{% endfor %}
{% endcomment %}