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.gitmodules
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.gitmodules
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[submodule "submodules"]
path = submodules
url = https://github.com/benedictpaten/jobTree.git
[submodule "subModules/jobTree"]
path = subModules/jobTree
url = https://github.com/benedictpaten/jobTree.git
[submodule "subModules/sonLib"]
path = subModules/sonLib
url = https://github.com/benedictpaten/sonLib.git
[submodule "submodules/bwa"]
path = submodules/bwa
url = https://github.com/lh3/bwa.git
[submodule "submodules/lastz"]
path = submodules/lastz
url = https://github.com/UCSCReconGroup/lastz.git
[submodule "submodules/jobTree"]
path = submodules/jobTree
url = https://github.com/benedictpaten/jobTree.git
[submodule "submodules/sonLib"]
path = submodules/sonLib
url = https://github.com/benedictpaten/sonLib.git
[submodule "submodules/last"]
path = submodules/last
url = https://github.com/UCSCReconGroup/last.git
[submodule "submodules/blasr"]
path = submodules/blasr
url = https://github.com/PacificBiosciences/blasr.git
[submodule "submodules/hdf5"]
path = submodules/hdf5
url = https://github.com/UCSCReconGroup/hdf5.git
[submodule "submodules/cactus"]
path = submodules/cactus
url = https://github.com/benedictpaten/cactus.git
[submodule "submodules/tokyocabinet"]
path = submodules/tokyocabinet
url = https://github.com/UCSantaCruzComputationalGenomicsLab/tokyocabinet.git
[submodule "submodules/cPecan"]
path = submodules/cPecan
url = https://github.com/benedictpaten/cPecan.git
[submodule "submodules/minimap2"]
path = submodules/minimap2
url = https://github.com/lh3/minimap2