fix: enum mapping from protobuf (#345)

src/clinvar_minimal/cli/reading.rs

@@ -87,12 +87,12 @@ impl From<VariantType> for crate::pbs::clinvar::minimal::VariantType {
 impl From<i32> for VariantType {
  fn from(value: i32) -> Self {
  match value {
- 0 => VariantType::Deletion,
- 1 => VariantType::Duplication,
- 2 => VariantType::Indel,
- 3 => VariantType::Insertion,
- 4 => VariantType::Inversion,
- 5 => VariantType::Snv,
+ 1 => VariantType::Deletion,
+ 2 => VariantType::Duplication,
+ 3 => VariantType::Indel,
+ 4 => VariantType::Insertion,
+ 5 => VariantType::Inversion,
+ 6 => VariantType::Snv,
  _ => unreachable!(),
  }
  }
@@ -184,11 +184,11 @@ impl From<ClinicalSignificance> for crate::pbs::clinvar::minimal::ClinicalSignif
 impl From<i32> for ClinicalSignificance {
  fn from(value: i32) -> Self {
  match value {
- 0 => ClinicalSignificance::Pathogenic,
- 1 => ClinicalSignificance::LikelyPathogenic,
- 2 => ClinicalSignificance::UncertainSignificance,
- 3 => ClinicalSignificance::LikelyBenign,
- 4 => ClinicalSignificance::Benign,
+ 1 => ClinicalSignificance::Pathogenic,
+ 2 => ClinicalSignificance::LikelyPathogenic,
+ 3 => ClinicalSignificance::UncertainSignificance,
+ 4 => ClinicalSignificance::LikelyBenign,
+ 5 => ClinicalSignificance::Benign,
  _ => unreachable!(),
  }
  }
@@ -302,13 +302,13 @@ impl From<ReviewStatus> for crate::pbs::clinvar::minimal::ReviewStatus {
 impl From<i32> for ReviewStatus {
  fn from(value: i32) -> Self {
  match value {
- 0 => ReviewStatus::PracticeGuideline,
- 1 => ReviewStatus::ReviewedByExpertPanel,
- 2 => ReviewStatus::CriteriaProvidedMultipleSubmittersNoConflicts,
- 3 => ReviewStatus::CriteriaProvidedSingleSubmitter,
- 4 => ReviewStatus::CriteriaProvidedConflictingInterpretations,
- 5 => ReviewStatus::NoAssertionCriteriaProvided,
- 6 => ReviewStatus::NoAssertionProvided,
+ 1 => ReviewStatus::PracticeGuideline,
+ 2 => ReviewStatus::ReviewedByExpertPanel,
+ 3 => ReviewStatus::CriteriaProvidedMultipleSubmittersNoConflicts,
+ 4 => ReviewStatus::CriteriaProvidedSingleSubmitter,
+ 5 => ReviewStatus::CriteriaProvidedConflictingInterpretations,
+ 6 => ReviewStatus::NoAssertionCriteriaProvided,
+ 7 => ReviewStatus::NoAssertionProvided,
  _ => unreachable!(),
  }
  }