Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fix: enforce ploidy in GATK gCNV ploidy calling wrapper #377

Merged
merged 1 commit into from
Feb 22, 2023

Conversation

holtgrewe
Copy link
Member

In particular for Agilent V8, the ploidy calls were very unreliable. We need to hard-fix this in the ploidy calling to get results at all. Complementary methods must be used for checking ploidy sanity.

In particular for Agilent V8, the ploidy calls were very unreliable.
We need to hard-fix this in the ploidy calling to get results at all.
Complementary methods must be used for checking ploidy sanity.
@holtgrewe holtgrewe force-pushed the fix-gcnv-ploidy-calling branch from 5a1c5b6 to cd0843a Compare February 22, 2023 14:31
@coveralls
Copy link

Coverage Status

Coverage: 84.865%. Remained the same when pulling cd0843a on fix-gcnv-ploidy-calling into 9717be7 on main.

1 similar comment
@coveralls
Copy link

Coverage Status

Coverage: 84.865%. Remained the same when pulling cd0843a on fix-gcnv-ploidy-calling into 9717be7 on main.

@holtgrewe holtgrewe merged commit f244691 into main Feb 22, 2023
@holtgrewe holtgrewe deleted the fix-gcnv-ploidy-calling branch February 22, 2023 14:39
@tedil tedil mentioned this pull request Jun 28, 2024
This was referenced Dec 9, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants