priors

Repository priors

These scripts will re-score an initial retrieval using the priors described in the paper.

Prior 1: Using training data

First, get the repository for each qrel:

cd ~/biocaddie
scripts/repo.sh > /data/biocaddie/data/biocaddie-doc-repo.out

Next, rescore an initial retrieval:

priors/rescore1.sh <input> <output>

For example

priors/rescore1.sh output/dir/combined/short output/dir-prior1/combined/short

Prior 2: Pseudo-feedback

Rescore an initial retrieval:

priors/rescore2.sh <input> <output>

For example

priors/rescore2.sh output/dir/combined/short output/dir-prior2/combined/short