meta.yaml

package:
  name: rseqc
  version: 2.6.4

source:
  url: https://pypi.python.org/packages/61/58/1d9c280d8d852f7c5e873c0635952fc19305b0805e9f0ace50e8ef2f93c3/RSeQC-2.6.4.tar.gz
  md5: 935779c452ffc84f3b8b9fb3d485c782

build:
  skip: True # [not py27]
  number: 2
  script: python -m pip install --no-deps --ignore-installed .

requirements:
  build:
    - {{ compiler('c') }}
    - {{ compiler('cxx') }}
  host:
    - python
    - setuptools
    - cython >=0.17
    - pysam
    - bx-python
    - numpy
    - nose

  run:
    - python
    - cython >=0.17
    - pysam
    - bx-python
    - numpy
    - r-base

test:
  imports:
    - qcmodule
    - qcmodule.SAM
  commands:
    - read_distribution.py 2>&1 | grep Usage > /dev/null
    - geneBody_coverage.py 2>&1 | grep Usage > /dev/null

about:
  home: http://rseqc.sourceforge.net/
  license: GNU General Public License v2 (GPLv2)
  summary: 'RNA-seq QC Package'
  license_family: GPL2

extra:
  identifiers:
    - biotools:rseqc
    - doi:10.1093/bioinformatics/bts356