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references.jsonld
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references.jsonld
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{
"@context": "http://schema.org",
"@id": "https://github.com/bioexcel/biobb_cmip",
"@type": "ItemList",
"name": "biobb_cmip",
"itemListElement":[
{
"@type": "SoftwareApplication",
"description": "The CMIP performs a series of analysis centered in the obtention of molecular interaction potentials using classic formalisms.",
"name": "Classical molecular interaction potentials",
"url": "https://mmb.irbbarcelona.org/gitlab/gelpi/CMIP",
"applicationCategory": "Computational Biology tool",
"citation": "https://onlinelibrary.wiley.com/doi/10.1002/prot.1159",
"license": "https://www.apache.org/licenses/LICENSE-2.0",
"softwareVersion": "2.7.0"
},
{
"@type": "SoftwareApplication",
"description": "MDAnalysis is an object-oriented Python library to analyze trajectories from molecular dynamics (MD) simulations in many popular formats.",
"name": "MDAnalysis",
"url": "https://www.mdanalysis.org/",
"applicationCategory": "Computational Biology tool",
"citation": "https://dx.doi.org/10.1002/jcc.21787",
"license": "https://www.gnu.org/licenses/lgpl-3.0.en.html",
"softwareVersion": "2.0.0"
},
{
"@type": "SoftwareApplication",
"description": "Biobb_structure_checking provides a series of functions to check the quality of a 3D structure intended to facilitate the setup of a molecular dynamics simulation of protein or nucleic acids systems.",
"name": "Biobb structure checking ",
"url": "https://github.com/bioexcel/biobb_structure_checking",
"applicationCategory": "Computational Biology tool",
"citation": null,
"license": "https://www.apache.org/licenses/LICENSE-2.0",
"softwareVersion": "3.13.4"
}
]
}