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Issue with "names.txt missing! at plasmidseeker.pl line 264." #28

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RightCake1 opened this issue Nov 15, 2022 · 2 comments
Open

Issue with "names.txt missing! at plasmidseeker.pl line 264." #28

RightCake1 opened this issue Nov 15, 2022 · 2 comments

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@RightCake1
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Hello, I am using the "plasmidseeker_db_w20_Nov-2021.tar.gz" database but still receiving the issue of
"Plasmid names file /home/mustafa/plasmidseeker_db_w20_Nov-2021//names.txt missing! at plasmidseeker.pl line 264."

This is the exact code that i used -
"perl plasmidseeker.pl -d /home/mustafa/plasmidseeker_db_w20_Nov-2021/ -i R1.fastq -b refseq.fasta -o PlasmidSeeker"

I'm still new to these so i'm not sure if i made any mistakes. Thanks in Advance!

@jiejiemao
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Have you solved this problem yet?

@RightCake1
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Have you solved this problem yet?

Greetings brother. I couldnt get any solution but i used an alternative for it. You can check my repo if interested https://github.com/RightCake1/WGS/tree/main/6_Mobile_genetic_elements

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