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taxanomy information at strain level #16

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dugala239 opened this issue Feb 18, 2024 · 5 comments
Open

taxanomy information at strain level #16

dugala239 opened this issue Feb 18, 2024 · 5 comments

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@dugala239
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Hey,

Will you provide the ASV sequence which may provide more info at strain level?

Thanks!

@jotech
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jotech commented Apr 12, 2024

It's a fantastic resource; I'm really enjoying using it!

I support the request. It would be great to have the ASV sequences to investigate strains and compare to other databases!

Do you mind adding the asv fasta to your zenodo repo?

@seandavi
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cc @rabdill?

@dugala239
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cc @rabdill?

It would be great if the sequences were public, very impressive work!

@rabdill
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rabdill commented Apr 15, 2024

I'm glad this has been useful so far! ASV-level information will definitely be included in the next data release, which we're planning to share in the next month or so. This will include an ASV table, all the sequences, and taxonomic assignments for each.

@jotech
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jotech commented Nov 28, 2024

@rabdill, just as a follow-up, have you already shared the new release, including the sequences?

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4 participants