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Support on using in Windows? #9
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Thanks for your interest in BPCells! I have good news which is that we fully support Windows. It can be a bit tricky to set up the first time since BPCells is not yet on CRAN, but I'll share my memory what I did when first setting up. Hopefully it will also work for you and if not please reply and I can try to improve my instructions :) The basic ingredients you need to install BPCells on any system (Windows or otherwise) are a C++ compiler, and the hdf5 libraries. On my windows machine, I have BPCells installed both in Windows itself, and in WSL (Ubuntu running within Windows). If you use want to install on Windows (most likely):
If you want to install in WSL:
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Thank you for the quick response. Here is my bug information:
Installing package into ‘D:/4.0’
Unable to locate libhdf5. Please install manually or edit compiler flags.
I was using R 4.2.3 and Rtools42. I can find Hdf5 in my Rtools42 folder. But there is still this bug. |
I upgraded my R to devel version and Rtools42 to Rtools43, it works. Thank you very much! |
Seurat V5 is coming, but my installation of BPCells in Windows never suceeded. Do you have any plan for support using BPCells in Windows?
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