v1.1.1

• Fix a bug that prevents submitting a zipped file as a dependency of a workflow.

v1.1.0

• Improve the help messages of CLI and add shorthands for submit command.
• Fix an issue that can stop local file from being normally processed.
• Fix the failing test by cleaning up the Dockerfile that relies on Oracle Java installer and move to use OpenJDK instead.
• Take the retry policy based on tenacity out from the cromwell-tools for clarity.
• Add token checker before making the header to avoid token expiration with OAuth.
• Fix a bug that prevents generating correct pagination parameters for POST /query endpoint.
• Update the pull-request-template.

v1.0.1

• Fix a bug with the service account key that prevents users from using any authentication methods.
• Fix a bug with /validate command in CLI.
• Fix a bug with /health endpoint in API.
• Improve the output of the CLI commands.
• Update the documentation, quickstart Jupyter notebook, and docstrings.
• Update the authentication dependency from the deprecated oauth2client to google-auth.
• Allow no-auth with Cromwell.

v1.0.0

Changes:

• A breaking refactoring work on both the CLI and API.
• More sophisticated unit tests.
• Support both Python2 and Python3, having tests run on both versions.
• Updated ReadMe file and docstrings.
• For /submit endpoint, we support both path to the file and file contents as inputs now.
• We have a quickstart example Jupyter Notebook now.
• Update requests to avoid security issues.
• Fix API calls in CLI.
• We have accessory tools with cromwell-tools, such as the workflow monitoring script.
• Other slight improvements and bug fixes.

Note: from this version we will start to publish this package on PyPI.

v0.5.0

• Add a new function to query workflows.
• Add a new function to release workflows from status On Hold to Submitted.

v0.4.0

• Add on_hold parameter to start_workflow
• Add workflow validation capability
• Add Sphinx autodoc and readthedocs hook
• Bugfix: Allow workflows without labels to be executed
• Bugfix: Fix docker container build issues

v0.3.1

Use officially blessed package setuptools_scm to control the version of Cromwell-tools, add __version__ attribute in the package level.

v0.3.0

Add option to use Cromwell-as-a-Service

Update the functions that make requests to Cromwell to send a bearer token generated from the CaaS key if the key is provided, otherwise use the username and password.

v0.2.0

• Enables Cromwell-tools to add labels to workflows at submission time, with an optional label validator implemented.

v0.1.0

• Fixes bug that prevented dependencies zip from being correctly sent to Cromwell.