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viral-core CI viral-core CI #252: Scheduled
June 3, 2024 18:01 10m 38s master
master
June 3, 2024 18:01 10m 38s
Scheduled CodeQL #3: by github-advanced-security bot
May 31, 2024 18:30 1m 54s
May 31, 2024 18:30 1m 54s
viral-core CI viral-core CI #251: Scheduled
May 27, 2024 18:00 9m 3s master
master
May 27, 2024 18:00 9m 3s
Scheduled CodeQL #2: by github-advanced-security bot
May 24, 2024 18:30 2m 33s
May 24, 2024 18:30 2m 33s
CodeQL Setup CodeQL #1: by tfhartmann
May 21, 2024 20:53 2m 25s
May 21, 2024 20:53 2m 25s
viral-core CI viral-core CI #250: Scheduled
May 20, 2024 18:00 9m 16s master
master
May 20, 2024 18:00 9m 16s
viral-core CI viral-core CI #249: Scheduled
May 13, 2024 18:00 9m 2s master
master
May 13, 2024 18:00 9m 2s
In cmd.py argparse common_args(), set default number of threads to all available if --threads is unspecified viral-core CI #248: Pull request #104 opened by tomkinsc
May 7, 2024 21:58 8m 54s ct-set-default-threads
ct-set-default-threads
May 7, 2024 21:58 8m 54s
In cmd.py argparse common_args(), set default number of threads to al… viral-core CI #247: Commit 3917cc5 pushed by tomkinsc
May 7, 2024 21:58 9m 32s ct-set-default-threads
ct-set-default-threads
May 7, 2024 21:58 9m 32s
add fgbio to conda dependencies viral-core CI #246: Pull request #103 opened by tomkinsc
May 7, 2024 16:46 9m 7s ct-add-fgbio
ct-add-fgbio
May 7, 2024 16:46 9m 7s
add fgbio to conda dependencies viral-core CI #245: Commit adb9dbc pushed by tomkinsc
May 7, 2024 16:46 9m 19s ct-add-fgbio
ct-add-fgbio
May 7, 2024 16:46 9m 19s
viral-core CI viral-core CI #244: Scheduled
May 6, 2024 18:01 8m 45s master
master
May 6, 2024 18:01 8m 45s
viral-core CI viral-core CI #243: Scheduled
April 29, 2024 18:01 8m 41s master
master
April 29, 2024 18:01 8m 41s
index bam before calling samtools idxstats; warn user if input lacks reads viral-core CI #242: Pull request #102 synchronize by tomkinsc
April 25, 2024 23:20 9m 14s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 23:20 9m 14s
do not explicitly set the format that coveralls expects for its input… viral-core CI #241: Commit 956ffeb pushed by tomkinsc
April 25, 2024 23:20 8m 53s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 23:20 8m 53s
index bam before calling samtools idxstats; warn user if input lacks reads viral-core CI #240: Pull request #102 synchronize by tomkinsc
April 25, 2024 23:05 9m 57s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 23:05 9m 57s
restore pytest-cov xml output (lost in a diff merge) viral-core CI #239: Commit 63a8742 pushed by tomkinsc
April 25, 2024 23:05 8m 47s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 23:05 8m 47s
index bam before calling samtools idxstats; warn user if input lacks reads viral-core CI #238: Pull request #102 synchronize by tomkinsc
April 25, 2024 22:54 9m 22s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 22:54 9m 22s
attempt to fix coverage reporting due to breaking changes in coverall… viral-core CI #237: Commit 13c5e90 pushed by tomkinsc
April 25, 2024 22:54 8m 53s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 22:54 8m 53s
index bam before calling samtools idxstats; warn user if input lacks reads viral-core CI #236: Pull request #102 synchronize by tomkinsc
April 25, 2024 21:53 8m 49s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 21:53 8m 49s
add pandas to deps viral-core CI #235: Commit d54f646 pushed by tomkinsc
April 25, 2024 21:53 9m 48s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 21:53 9m 48s
index bam before calling samtools idxstats; warn user if input lacks reads viral-core CI #234: Pull request #102 opened by tomkinsc
April 25, 2024 21:27 8m 48s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 21:27 8m 48s
index bam before calling samtools idxstats; warn user if input lacks … viral-core CI #233: Commit 4fd0129 pushed by tomkinsc
April 25, 2024 21:27 10m 7s ct-bugfix-minimap2_idxstats
ct-bugfix-minimap2_idxstats
April 25, 2024 21:27 10m 7s
viral-core CI viral-core CI #232: Scheduled
April 22, 2024 18:00 9m 4s master
master
April 22, 2024 18:00 9m 4s
viral-core CI viral-core CI #231: Scheduled
April 15, 2024 18:00 9m 16s master
master
April 15, 2024 18:00 9m 16s