NAMESPACE

exportPattern("^[[:alpha:]]+")


importFrom(dplyr,filter,rename,mutate,distinct,select,left_join,bind_rows,"%>%",arrange,
           group_by,n_distinct,select_,do,summarize,ungroup,contains,mutate_,
           inner_join,one_of,summarise,bind_cols,everything,as_tibble,n)
importFrom(tidyr,gather,spread_,spread)
importFrom(parallel,makeCluster,stopCluster,clusterExport,detectCores,
           parLapply,parSapply,clusterEvalQ,parLapplyLB)
importFrom(ggplot2, aes, aes_string, element_text, facet_grid,element_blank,
           facet_wrap, geom_bar, geom_errorbar, geom_histogram,element_rect,
           geom_line, geom_point, geom_text, geom_vline, ggplot,stat_ellipse,
           ggplot_build, qplot, scale_fill_hue, scale_x_continuous,geom_hline,
           scale_y_continuous, theme, theme_bw,xlab,ylab,ggtitle,geom_path,
           scale_fill_discrete,scale_fill_gradient,annotate,geom_smooth,
           xlim,scale_colour_manual,stat_function,scale_x_discrete,aes_,
           scale_y_log10,geom_density2d,scale_shape_manual,guide_legend,
           coord_cartesian,scale_shape_discrete,geom_jitter,position_jitter,
           geom_density,coord_flip,labs,expand_limits,geom_boxplot,guides,
           scale_color_manual,ylim,geom_violin,stat_summary,stat_ecdf,
           scale_fill_manual)
importFrom(stringr,str_replace_all)
importFrom(readr,read_tsv,write_tsv)
importFrom(rmarkdown,render)
importFrom(formattable,color_bar)
importFrom(kableExtra,cell_spec,spec_font_size)
importFrom(kBET,pcRegression,batch_sil,kBET)
importFrom(metaX, filterPeaks,removeSample,metaXpipe,reSetPeaksData,
           checkSampleList,makeDirectory,hasQC,printCV,plotPeakNumber,
           plotCV,plotMissValue,plotIntDistr,plotCorHeatmap,plotPeakSumDist,
           plotPeakMeanDist,missingValueImpute,transformation,getTable,
           preProcess,plotPCA,plotHeatMap,peakStat,featureSelection,filterQCPeaks)
importFrom(NetSAM,MatNet)
importFrom(plotly,plot_ly,add_trace,layout)
importFrom(xgboost,xgb.cv)
importFrom(pROC,roc)
importFrom(ComplexHeatmap,make_comb_mat,draw,UpSet,column_order,comb_size,decorate_annotation,
           HeatmapAnnotation,anno_barplot,comb_degree)
importFrom(ggpubr,theme_pubr,theme_classic2)