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Please keep this checklist for curation of a new study.
create an issue on datahub before curating a study (one issue per study) and copy this checklist to the issue tracker
List information of the dataset/paper in the issue, e.g. pmid, paper link, suppl file link
Description: Small set of expression data to compare plexiforme neurofibroma cell lines.
Paper: Carrió M et al. Reprogramming Captures the Genetic and Tumorigenic Properties of Neurofibromatosis Type 1 Plexiform Neurofibromas. Stem Cell Reports. doi: 10.1016/j.stemcr.2019.01.001
Please keep this checklist for curation of a new study.
Description: Small set of expression data to compare plexiforme neurofibroma cell lines.
Paper: Carrió M et al. Reprogramming Captures the Genetic and Tumorigenic Properties of Neurofibromatosis Type 1 Plexiform Neurofibromas. Stem Cell Reports. doi: 10.1016/j.stemcr.2019.01.001
The The Neurofibromatosis Therapeutic Acceleration Program org funded NF-OSI team at Sage to process the data and submit to the public cBioPortal for a selection of their funded studies. Processing pipelines are described here: NPD-Nextflow Data Processing & Configuration-161122-155435.pdf.
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