This repository was archived by the owner on Oct 28, 2021. It is now read-only.
-
Notifications
You must be signed in to change notification settings - Fork 1
/
Copy pathgeodesic_distance.js
177 lines (148 loc) · 5.3 KB
/
geodesic_distance.js
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
import { FibonacciHeap } from "@tyriar/fibonacci-heap";
import { Q_TYPES } from "../constants";
import store from "../components/Store";
import MinSet from "./MinSet";
import MinHeap from "./MinHeap";
export const dijkstra = (qType, source, targets = []) => {
const logger = store;
const { graph } = store;
let startTime, elapsedTime;
startTime = new Date();
logger && logger.log("Initializing Dijkstra sets...");
// 1 function Dijkstra(Graph, source):
// 2
// 3 create vertex set Q
let Q;
switch (Q_TYPES[qType]) {
case Q_TYPES.Set:
logger && logger.log("\tUsing a Set.");
Q = new MinSet();
break;
case Q_TYPES.MinHeap:
logger && logger.log("\tUsing a Min Heap.");
Q = new MinHeap();
break;
case Q_TYPES.FibonacciHeap:
logger && logger.log("\tUsing a Fibonacci Heap.");
Q = new FibonacciHeap();
break;
}
const distances = new Map();
const previous = new Map();
const nodeMapping = new Map();
// 4
// 5 for each vertex v in Graph:
// 6 dist[v] ← INFINITY
// 7 prev[v] ← UNDEFINED
// 8 add v to Q
// 10 dist[source] ← 0
graph.vertices.forEach((v) => {
const vDistance = v === source ? 0 : Infinity;
distances.set(v, vDistance);
previous.set(v, undefined);
nodeMapping.set(v, Q.insert(vDistance, v));
});
elapsedTime = new Date() - startTime;
logger && logger.log(`\tdone in ${elapsedTime.toLocaleString()}ms.`);
startTime = new Date();
logger && logger.log(`Finding shortest paths...`);
// 11
// 12 while Q is not empty:
// 13 u ← vertex in Q with min dist[u]
// 14
// 15 remove u from Q
let u = undefined;
let encounteredTargetsCount = 0;
while (!Q.isEmpty()) {
const u = Q.extractMinimum().value;
if (targets.includes(u)) {
encounteredTargetsCount++;
}
if (encounteredTargetsCount > 0 && encounteredTargetsCount === targets.length) {
logger && logger.log(`\tAll given targets reached, exiting early...`);
break;
}
// 16
// 17 for each neighbor v of u:
// 18 alt ← dist[u] + length(u, v)
// 19 if alt < dist[v]:
// 20 dist[v] ← alt
// 21 prev[v] ← u
graph.neighbors(u).forEach((v) => {
const alt = distances.get(u) + graph.edge(u, v);
if (alt < distances.get(v)) {
Q.decreaseKey(nodeMapping.get(v), alt);
distances.set(v, alt);
previous.set(v, u);
}
});
}
elapsedTime = new Date() - startTime;
logger && logger.log(`\tdone in ${elapsedTime.toLocaleString()}ms.`);
// 22
// 23 return dist[], prev[]
return {
distances,
previous,
target: u,
};
};
export const traverse = (distances, previous, source, target) => {
const logger = store;
let startTime, elapsedTime;
// 1 S ← empty sequence
// 2 u ← target
// 3 if prev[u] is defined or u = source: // Do something only if the vertex is reachable
// 4 while u is defined: // Construct the shortest path with a stack S
// 5 insert u at the beginning of S // Push the vertex onto the stack
// 6 u ← prev[u] // Traverse from target to source
startTime = new Date();
logger && logger.log(`Traversing shortest path...`);
const S = [];
let u = target;
if (previous.get(u) || u === source) {
while (u) {
S.unshift(u);
u = previous.get(u);
}
}
elapsedTime = new Date() - startTime;
logger && logger.log(`\tdone in ${elapsedTime.toLocaleString()}ms.`);
return {
distance: distances.get(target),
path: S,
};
};
export function findGeodesicDistance({ qType, source, target }) {
const { distances, previous } = dijkstra(qType, source, [target]);
return traverse(distances, previous, source, target);
}
export function populateGeodesicDistanceMatrix({ geometry, qType }) {
const matrix = new Map();
geometry.vertices.forEach((source) => {
matrix.set(`${source.x}:${source.y}:${source.z}`, new Map());
const { distances } = dijkstra(qType, source);
distances.forEach((distance, target) => {
matrix
.get(`${source.x}:${source.y}:${source.z}`)
.set(`${target.x}:${target.y}:${target.z}`, distance);
});
Array.from(matrix.get(`${source.x}:${source.y}:${source.z}`).keys())
.sort()
.reduce((accumulator, currentValue) => {
accumulator[currentValue] = matrix
.get(`${source.x}:${source.y}:${source.z}`)
.get(currentValue);
return accumulator;
}, {});
});
Array.from(matrix.keys())
.sort()
.reduce((accumulator, currentValue) => {
accumulator[currentValue] = matrix.get(currentValue);
return accumulator;
}, {});
return {
matrix,
};
}