Structure of paths

[JohnStout]

Currently using the miniscope v4.4 with the latest software from Aharoni. Unfortunately, the saved structure mentioned in the ndx-miniscope intro does not match the structure of the saved data (attached image). The error (assert miniscope_folder_paths error below line 26) mentioned was solved by adding the code below to the init (see second image). But then I discovered this issue was present in other files and so wanted to create an issue.

dir_contents = sorted(os.listdir(folder_path)); miniscope_name = [i for i in dir_contents if 'miniscope' in i.lower()][0]; miniscope_folder_paths = list(Path(folder_path).rglob(miniscope_name))

Of course I could always change the structure of my paths, but wanted to mention this!

Thanks as always,
-John

[CodyCBakerPhD]

Thanks John!

cc @alessandratrapani: just wanted to make sure you knew about this going into any future Miniscope work; we can discuss strategy on how best to enforce/allow folder structures across different source versions

[h-mayorquin]

Hi, @JohnStout . In the screenshoot that you shared, where are the video files? In the miniscopeDeviceName folder?

[JohnStout]

@h-mayorquin that would be correct here. I am not currently working with these kinds of data, but I do believe that was the case.