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Releases: cctbx/cctbx_project

2021.8

03 Sep 17:52
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  • Added tools for processing predicted models based on the error estimate
  • Updated list of modified amino and nucleic acids
  • Better handling of sequence files with empty sequences

2021.7

03 Aug 06:04
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  • Fix pickling error with anomalous_probability_plot
  • Fix bug in reading data CIF file with paired data and sigma arrays of
    different sizes
  • Added functions for retrieving H-bond types and Van der Waals radii to
    the model manager class
  • Sequence validation will only use protein or nucleic acid residues for
    alignment

2021.6

01 Jul 18:46
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  • More improvements to bulk solvent masking for multiple regions
  • Updates to ensemble refinement
  • Enable conversion of some numpy types into flex types instead of
    requiring that the types match (e.g. int to float is now supported)

2021.5

02 Jun 01:45
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  • Improved bulk solvent masking with support for multiple regions

2021.4

13 May 05:15
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  • Improved parsing of reciprocal space data in CIF
  • CCTBXParser can handle intermixed arguments for Python >= 3.7
  • Consolidate management of conda depenencies with conda-devenv

2021.3

04 Apr 20:40
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  • Initial support for native compilation on Apple Silicon

  • Real-space refinement of occupancies and isotropic ADP

  • Improvements in map_model_manager

    • Split up map and model by NCS groups
    • Create new map_model_manager with resampled maps

2021.2

03 Mar 03:48
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  • Improved remediator code for converting PDB version 2 format to version 3
  • Add compilation support for Boost 1.72 and 1.74

2021.1

02 Feb 06:23
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  • Improvements to cctbx.HKLviewer for displaying reciprocal space data

2020.12

29 Dec 04:26
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  • BIOMT/MTRIX matrices in model reading

    • Added option to loosen handling of improper matrices in DataManager
    • Make behavior conistent between mmCIF and PDB formats
  • Improvements to map_model_manager

    • Better handling of cases when information is missing
    • Calculate the RMSD of matching residues between models

2020.11

08 Dec 03:46
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  • Updated API for fetching data from RCSB