unused argument (sct = FALSE) in paramSweep

[lizh0205]

Hello developer,

Thanks for sharing this tool.

I used to run it smoothly with seurat4. However, when I changed to seurat5, I got this error when running paramSweep. My doubletfinder version is 2.0.3.
sweep.res.list <- paramSweep(seurat, PCs = 1:30, sct = FALSE)
Error in paramSweep(seurat, PCs = 1:30, sct = FALSE) :
unused argument (sct = FALSE)

Could you please suggest any solution to this?

[yuzu1999]

Hello, I encountered the same problem, my doubletfinder version is 2.0.4, Seurat version is 5.0.1, do you solve this problem ?

[ZhuoLi1986]

Hello, I encountered the same problem, my doubletfinder version is 2.0.4, Seurat version is 5.0.1, do you solve this problem ?

I downgraded my Seurat back to Seurat4 and it is working now.