-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathnetcdf.spec
248 lines (218 loc) · 7.9 KB
/
netcdf.spec
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
#
# This file is auto-generated. DO NOT EDIT
# Generated by: autospec.py
#
Name : netcdf
Version : 4.9.2
Release : 17
URL : https://github.com/Unidata/netcdf-c/archive/v4.9.2/netcdf-c-4.9.2.tar.gz
Source0 : https://github.com/Unidata/netcdf-c/archive/v4.9.2/netcdf-c-4.9.2.tar.gz
Summary : NetCDF Client Library for C
Group : Development/Tools
License : BSD-3-Clause NetCDF Zlib bzip2-1.0.6
Requires: netcdf-bin = %{version}-%{release}
Requires: netcdf-lib = %{version}-%{release}
Requires: netcdf-license = %{version}-%{release}
Requires: netcdf-man = %{version}-%{release}
Requires: netcdf-openmpi = %{version}-%{release}
BuildRequires : buildreq-cmake
BuildRequires : bzip2-dev
BuildRequires : chrpath
BuildRequires : curl-dev
BuildRequires : graphviz
BuildRequires : hdf5-dev
BuildRequires : libxml2-dev
BuildRequires : modules
BuildRequires : openmpi-dev
BuildRequires : openssh
BuildRequires : zlib-dev
BuildRequires : zstd-dev
# Suppress stripping binaries
%define __strip /bin/true
%define debug_package %{nil}
%description
The Unidata network Common Data Form (netCDF) is an interface for scientific data access
and a freely-distributed software library that provides an implementation of the interface.
The netCDF library also defines a machine-independent format for representing scientific data.
Together, the interface, library, and format support the creation, access, and sharing of
scientific data. The current netCDF software provides C interfaces for applications and data.
%package bin
Summary: bin components for the netcdf package.
Group: Binaries
Requires: netcdf-license = %{version}-%{release}
%description bin
bin components for the netcdf package.
%package dev
Summary: dev components for the netcdf package.
Group: Development
Requires: netcdf-lib = %{version}-%{release}
Requires: netcdf-bin = %{version}-%{release}
Requires: netcdf-openmpi = %{version}-%{release}
Provides: netcdf-devel = %{version}-%{release}
Requires: netcdf = %{version}-%{release}
%description dev
dev components for the netcdf package.
%package lib
Summary: lib components for the netcdf package.
Group: Libraries
Requires: netcdf-license = %{version}-%{release}
%description lib
lib components for the netcdf package.
%package license
Summary: license components for the netcdf package.
Group: Default
%description license
license components for the netcdf package.
%package man
Summary: man components for the netcdf package.
Group: Default
%description man
man components for the netcdf package.
%package openmpi
Summary: openmpi components for the netcdf package.
Group: Default
%description openmpi
openmpi components for the netcdf package.
%prep
%setup -q -n netcdf-c-4.9.2
cd %{_builddir}/netcdf-c-4.9.2
pushd ..
cp -a netcdf-c-4.9.2 build-openmpi
popd
%build
export http_proxy=http://127.0.0.1:9/
export https_proxy=http://127.0.0.1:9/
export no_proxy=localhost,127.0.0.1,0.0.0.0
export LANG=C.UTF-8
export SOURCE_DATE_EPOCH=1678981530
export GCC_IGNORE_WERROR=1
export CFLAGS="$CFLAGS -fdebug-types-section -femit-struct-debug-baseonly -fno-lto -g1 -gno-column-info -gno-variable-location-views -gz "
export FCFLAGS="$FFLAGS -fdebug-types-section -femit-struct-debug-baseonly -fno-lto -g1 -gno-column-info -gno-variable-location-views -gz "
export FFLAGS="$FFLAGS -fdebug-types-section -femit-struct-debug-baseonly -fno-lto -g1 -gno-column-info -gno-variable-location-views -gz "
export CXXFLAGS="$CXXFLAGS -fdebug-types-section -femit-struct-debug-baseonly -fno-lto -g1 -gno-column-info -gno-variable-location-views -gz "
%configure --disable-static --enable-shared \
--enable-netcdf-4 \
--enable-dap \
--disable-dap-remote-tests \
--with-pic \
--disable-doxygen
make %{?_smp_mflags}
pushd ../build-openmpi/
. /usr/share/defaults/etc/profile.d/modules.sh
module load openmpi
export CFLAGS="$CFLAGS -m64 -march=x86-64-v3"
export CXXFLAGS="$CXXFLAGS -m64 -march=x86-64-v3"
export FCFLAGS="$FCFLAGS -m64 -march=x86-64-v3"
export FFLAGS="$FFLAGS -m64 -march=x86-64-v3"
export LDFLAGS="$LDFLAGS -m64 -march=x86-64-v3"
./configure --program-prefix= --exec-prefix=$MPI_ROOT \
--libdir=$MPI_LIB --bindir=$MPI_BIN --sbindir=$MPI_BIN --includedir=$MPI_INCLUDE \
--datarootdir=$MPI_ROOT/share --mandir=$MPI_MAN -exec-prefix=$MPI_ROOT --sysconfdir=$MPI_SYSCONFIG \
--build=x86_64-generic-linux-gnu --host=x86_64-generic-linux-gnu --target=x86_64-clr-linux-gnu \
--disable-static --enable-shared \
--enable-netcdf-4 \
--enable-dap \
--disable-dap-remote-tests \
--with-pic \
--disable-doxygen \
--enable-parallel-tests \
--with-mpiexec="mpiexec -x LD_LIBRARY_PATH "
make %{?_smp_mflags}
module unload openmpi
popd
%check
export LANG=C.UTF-8
export http_proxy=http://127.0.0.1:9/
export https_proxy=http://127.0.0.1:9/
export no_proxy=localhost,127.0.0.1,0.0.0.0
make %{?_smp_mflags} check || :
cd ../build-openmpi;
module load openmpi
export OMPI_MCA_rmaps_base_oversubscribe=1
make %{?_smp_mflags} check || :
module unload openmpi
%install
export SOURCE_DATE_EPOCH=1678981530
rm -rf %{buildroot}
mkdir -p %{buildroot}/usr/share/package-licenses/netcdf
cp %{_builddir}/netcdf-c-%{version}/COPYRIGHT %{buildroot}/usr/share/package-licenses/netcdf/1b45343da188e7ec176d9443c8c3312798532bfc || :
cp %{_builddir}/netcdf-c-%{version}/libncpoco/COPYRIGHT %{buildroot}/usr/share/package-licenses/netcdf/40d457464182a97555b0946e7a957944d32a2b40 || :
cp %{_builddir}/netcdf-c-%{version}/libncxml/license.txt %{buildroot}/usr/share/package-licenses/netcdf/409ff756b1f0bb05818f6ac0996facc6de1dc7d1 || :
cp %{_builddir}/netcdf-c-%{version}/plugins/BZIP2_LICENSE %{buildroot}/usr/share/package-licenses/netcdf/ddf157bc55ed6dec9541e4af796294d666cd0926 || :
pushd ../build-openmpi/
module load openmpi
%make_install_openmpi
module unload openmpi
popd
%make_install
%files
%defattr(-,root,root,-)
/usr/lib64/libnetcdf.settings
%files bin
%defattr(-,root,root,-)
/usr/bin/nc-config
/usr/bin/nc4print
/usr/bin/nccopy
/usr/bin/ncdump
/usr/bin/ncgen
/usr/bin/ncgen3
/usr/bin/ocprint
%files dev
%defattr(-,root,root,-)
/usr/include/netcdf.h
/usr/include/netcdf_aux.h
/usr/include/netcdf_dispatch.h
/usr/include/netcdf_filter.h
/usr/include/netcdf_filter_build.h
/usr/include/netcdf_filter_hdf5_build.h
/usr/include/netcdf_json.h
/usr/include/netcdf_mem.h
/usr/include/netcdf_meta.h
/usr/lib64/libnetcdf.so
/usr/lib64/openmpi/include/netcdf.h
/usr/lib64/openmpi/include/netcdf_aux.h
/usr/lib64/openmpi/include/netcdf_dispatch.h
/usr/lib64/openmpi/include/netcdf_filter.h
/usr/lib64/openmpi/include/netcdf_filter_build.h
/usr/lib64/openmpi/include/netcdf_filter_hdf5_build.h
/usr/lib64/openmpi/include/netcdf_json.h
/usr/lib64/openmpi/include/netcdf_mem.h
/usr/lib64/openmpi/include/netcdf_meta.h
/usr/lib64/openmpi/include/netcdf_par.h
/usr/lib64/openmpi/lib/libnetcdf.settings
/usr/lib64/openmpi/lib/libnetcdf.so
/usr/lib64/openmpi/lib/pkgconfig/netcdf.pc
/usr/lib64/pkgconfig/netcdf.pc
/usr/share/man/man3/netcdf.3
%files lib
%defattr(-,root,root,-)
/usr/lib64/libnetcdf.so.19
/usr/lib64/libnetcdf.so.19.2.2
%files license
%defattr(0644,root,root,0755)
/usr/share/package-licenses/netcdf/1b45343da188e7ec176d9443c8c3312798532bfc
/usr/share/package-licenses/netcdf/409ff756b1f0bb05818f6ac0996facc6de1dc7d1
/usr/share/package-licenses/netcdf/40d457464182a97555b0946e7a957944d32a2b40
/usr/share/package-licenses/netcdf/ddf157bc55ed6dec9541e4af796294d666cd0926
%files man
%defattr(0644,root,root,0755)
/usr/share/man/man1/nccopy.1
/usr/share/man/man1/ncdump.1
/usr/share/man/man1/ncgen.1
/usr/share/man/man1/ncgen3.1
%files openmpi
%defattr(-,root,root,-)
/usr/lib64/openmpi/bin/nc-config
/usr/lib64/openmpi/bin/nc4print
/usr/lib64/openmpi/bin/nccopy
/usr/lib64/openmpi/bin/ncdump
/usr/lib64/openmpi/bin/ncgen
/usr/lib64/openmpi/bin/ncgen3
/usr/lib64/openmpi/bin/ocprint
/usr/lib64/openmpi/lib/libnetcdf.so.19
/usr/lib64/openmpi/lib/libnetcdf.so.19.2.2
/usr/lib64/openmpi/share/man/man1/nccopy.1
/usr/lib64/openmpi/share/man/man1/ncdump.1
/usr/lib64/openmpi/share/man/man1/ncgen.1
/usr/lib64/openmpi/share/man/man1/ncgen3.1
/usr/lib64/openmpi/share/man/man3/netcdf.3