Links to VCCF Viz datasets:
Sorger Skin:
- https://cdn.humanatlas.io/image-store/vccf-data-cell-nodes/unpublished/skin-confocal-sorgerlab/phenotypes_invasive_margin-nodes.csv
- https://cdn.humanatlas.io/image-store/vccf-data-cell-nodes/unpublished/skin-confocal-sorgerlab/phenotypes_melanoma_in_situ-nodes.csv
Xenium colon:
- https://cdn.humanatlas.io/image-store/vccf-data-cell-nodes/unpublished/colon-xenium-stanford/layer_3-nodes.csv
- Replace the number in "layer_3" with numbers from 3 through 31 for other slices in the z-stack. (28 layers in total)
- Replace "nodes" with "edges" in filenames for the edge/link files.
- Columns in edge files are: cell_id (corresponding to the row of cell in nodes file), x1, y1, z1, x2, y2, z2