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conda-build --channel CHANNEL --override-channels always includes the "default" channel #5338

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truemerrill opened this issue May 13, 2024 · 1 comment
Closed
2 tasks done

conda-build --channel CHANNEL --override-channels always includes the "default" channel #5338

truemerrill opened this issue May 13, 2024 · 1 comment
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duplicate indicate issues/PRs that are duplicates of another locked [bot] locked due to inactivity type::bug describes erroneous operation, use severity::* to classify the type

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@truemerrill
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  • I added a descriptive title
  • I searched open reports and couldn't find a duplicate

What happened?

Issue

conda-build --help provides the following description of the --override-channels flag:

--override-channels   Do not search default or .condarc channels. Requires --channel.

But in fact the default channel is always searched. This is an issue for air-gapped machines where the default channel is unreachable but a local mirror is available. In such cases, conda-build will timeout while trying to fetch the index of http://repo.anaconda.org.

Why "default" always added

  • The conda-build main function eventually calls conda_build.environ.get_install_actions.
  • At line 861, get_install_actions calls conda_build.index.get_build_index without providing the omit_defaults keyword argument. The default value of omit_defaults is False.
  • Because omit_defaults is always set to the default value False, there is no possible command-line flag or .condarc setting that can ever make omit_defaults equal to True.
  • The effect of omit_defaults = False is that conda.core.index.calculate_channel_urls is called with the argument prepend = True. This adds the default channel to the list of channel URLs.
  • This contradicts the description of the --override-channels flag, since the default channel is always present.

Conda Info

libmamba version : 1.5.8
     micromamba version : 1.5.8
           curl version : libcurl/8.4.0 (SecureTransport) LibreSSL/3.3.6 zlib/1.2.12 nghttp2/1.58.0
     libarchive version : libarchive 3.5.3 zlib/1.2.12 liblzma/5.4.3 bz2lib/1.0.8
       envs directories : /Users/jmerrill3/.micromamba/envs
          package cache : /Users/jmerrill3/.micromamba/pkgs
                          /Users/jmerrill3/.mamba/pkgs
            environment : analysis (active)
           env location : /Users/jmerrill3/.micromamba/envs/analysis
      user config files : /Users/jmerrill3/.mambarc
 populated config files : /Users/jmerrill3/.condarc
       virtual packages : __unix=0=0
                          __osx=14.4.1=0
                          __archspec=1=arm64
               channels : https://repo.anaconda.com/pkgs/main/osx-arm64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/osx-arm64
                          https://repo.anaconda.com/pkgs/r/noarch
                          https://conda.anaconda.org/conda-forge/osx-arm64
                          https://conda.anaconda.org/conda-forge/noarch
       base environment : /Users/jmerrill3/.micromamba
               platform : osx-arm64

Conda Config

Configuration files (by precedence order):
~/.condarc

Conda list

List of packages in environment: "/Users/jmerrill3/.micromamba/envs/analysis"

  Name                           Version     Build               Channel    
──────────────────────────────────────────────────────────────────────────────
  alabaster                      0.7.12      pyhd3eb1b0_0                   
  attrs                          23.1.0      py39hca03da5_0                 
  babel                          2.11.0      py39hca03da5_0                 
  beautifulsoup4                 4.12.2      py39hca03da5_0                 
  black                          24.3.0      py39hca03da5_0                 
  blas                           1.0         openblas                       
  boltons                        23.0.0      py39hca03da5_0                 
  bottleneck                     1.3.7       py39hbda83bc_0                 
  brotli                         1.0.9       h80987f9_8                     
  brotli-bin                     1.0.9       h80987f9_8                     
  brotli-python                  1.0.9       py39h313beb8_8                 
  bzip2                          1.0.8       h80987f9_6                     
  ca-certificates                2024.3.11   hca03da5_0                     
  cctools                        949.0.1     hc179dcd_25                    
  cctools_osx-arm64              949.0.1     h332cad3_25                    
  certifi                        2024.2.2    py39hca03da5_0                 
  cffi                           1.16.0      py39h80987f9_1                 
  chardet                        4.0.0       py39hca03da5_1003              
  charset-normalizer             2.0.4       pyhd3eb1b0_0                   
  click                          8.1.7       py39hca03da5_0                 
  colorama                       0.4.6       py39hca03da5_0                 
  conda                          23.7.4      py39hca03da5_0                 
  conda-build                    24.3.0      py39hca03da5_0                 
  conda-index                    0.4.0       pyhd3eb1b0_0                   
  conda-package-handling         2.0.2       py_0                conda      
  conda-package-streaming        0.9.0       py_0                conda      
  contourpy                      1.2.0       py39h48ca7d4_0                 
  cryptography                   42.0.5      py39hd4332d6_1                 
  cycler                         0.11.0      pyhd3eb1b0_0                   
  docutils                       0.18.1      py39hca03da5_3                 
  exceptiongroup                 1.2.0       py39hca03da5_0                 
  filelock                       3.13.1      py39hca03da5_0                 
  flake8                         7.0.0       py39hca03da5_0                 
  fonttools                      4.51.0      py39h80987f9_0                 
  freetype                       2.12.1      h1192e45_0                     
  icu                            73.1        h313beb8_0                     
  idna                           3.7         py39hca03da5_0                 
  imagesize                      1.4.1       py39hca03da5_0                 
  importlib-metadata             7.0.1       py39hca03da5_0                 
  importlib_resources            6.1.1       py39hca03da5_1                 
  iniconfig                      1.1.1       pyhd3eb1b0_0                   
  isort                          5.9.3       pyhd3eb1b0_0                   
  jinja2                         3.1.3       py39hca03da5_0                 
  jpeg                           9e          h80987f9_1                     
  jsonpatch                      1.33        py39hca03da5_1                 
  jsonpointer                    2.1         pyhd3eb1b0_0                   
  jsonschema                     4.19.2      py39hca03da5_0                 
  jsonschema-specifications      2023.7.1    py39hca03da5_0                 
  kiwisolver                     1.4.4       py39h313beb8_0                 
  lcms2                          2.12        hba8e193_0                     
  ld64                           530         hb29bf3f_25                    
  ld64_osx-arm64                 530         h001ce53_25                    
  ldid                           2.1.5       h20b2a84_3                     
  lerc                           3.0         hc377ac9_0                     
  libarchive                     3.6.2       h62fee54_3                     
  libbrotlicommon                1.0.9       h80987f9_8                     
  libbrotlidec                   1.0.9       h80987f9_8                     
  libbrotlienc                   1.0.9       h80987f9_8                     
  libcxx                         14.0.6      h848a8c0_0                     
  libdeflate                     1.17        h80987f9_1                     
  libffi                         3.4.4       hca03da5_1                     
  libgfortran                    5.0.0       11_3_0_hca03da5_28             
  libgfortran5                   11.3.0      h009349e_28                    
  libiconv                       1.16        h80987f9_3                     
  liblief                        0.12.3      h313beb8_0                     
  libllvm14                      14.0.6      h7ec7a93_3                     
  libopenblas                    0.3.21      h269037a_0                     
  libpng                         1.6.39      h80987f9_0                     
  libtiff                        4.5.1       h313beb8_0                     
  libwebp-base                   1.3.2       h80987f9_0                     
  libxml2                        2.10.4      h0b34f26_2                     
  llvm-openmp                    14.0.6      hc6e5704_0                     
  lz4-c                          1.9.4       h313beb8_1                     
  markupsafe                     2.1.3       py39h80987f9_0                 
  matplotlib                     3.8.4       py39hca03da5_0                 
  matplotlib-base                3.8.4       py39h46d7db6_0                 
  mccabe                         0.7.0       pyhd3eb1b0_0                   
  menuinst                       2.0.2       py39hca03da5_1                 
  more-itertools                 10.1.0      py39hca03da5_0                 
  mypy                           1.8.0       py39h80987f9_0                 
  mypy_extensions                1.0.0       py39hca03da5_0                 
  ncurses                        6.4         h313beb8_0                     
  numexpr                        2.8.7       py39hecc3335_0                 
  numpy                          1.26.4      py39h3b2db8e_0                 
  numpy-base                     1.26.4      py39ha9811e2_0                 
  openjpeg                       2.3.0       h7a6adac_2                     
  openssl                        3.0.13      h1a28f6b_1                     
  packaging                      23.2        py39hca03da5_0                 
  pandas                         2.2.1       py39h313beb8_0                 
  patch                          2.7.6       hca03da5_1001                  
  pathspec                       0.10.3      py39hca03da5_0                 
  patsy                          0.5.3       py39hca03da5_0                 
  pillow                         10.3.0      py39h80987f9_0                 
  pip                            24.0        py39hca03da5_0                 
  pkginfo                        1.9.6       py39hca03da5_0                 
  platformdirs                   3.10.0      py39hca03da5_0                 
  pluggy                         1.0.0       py39hca03da5_1                 
  psutil                         5.9.0       py39h1a28f6b_0                 
  py-lief                        0.12.3      py39h313beb8_0                 
  pybind11-abi                   4           hd3eb1b0_1                     
  pycodestyle                    2.11.1      py39hca03da5_0                 
  pycosat                        0.6.6       py39h80987f9_1                 
  pycparser                      2.21        pyhd3eb1b0_0                   
  pyflakes                       3.2.0       py39hca03da5_0                 
  pygments                       2.15.1      py39hca03da5_1                 
  pyopenssl                      24.0.0      py39hca03da5_0                 
  pyparsing                      3.0.9       py39hca03da5_0                 
  pysocks                        1.7.1       py39hca03da5_0                 
  pytest                         7.4.0       py39hca03da5_0                 
  python                         3.9.19      hb885b13_1                     
  python-dateutil                2.9.0post0  py39hca03da5_0                 
  python-libarchive-c            2.9         pyhd3eb1b0_1                   
  python-tzdata                  2023.3      pyhd3eb1b0_0                   
  pytz                           2024.1      py39hca03da5_0                 
  pyyaml                         6.0.1       py39h80987f9_0                 
  readline                       8.2         h1a28f6b_0                     
  referencing                    0.30.2      py39hca03da5_0                 
  requests                       2.31.0      py39hca03da5_1                 
  rpds-py                        0.10.6      py39hf0e4da2_0                 
  ruamel.yaml                    0.17.21     py39h1a28f6b_0                 
  ruamel.yaml.clib               0.2.6       py39h1a28f6b_1                 
  scipy                          1.13.0      py39h20cbe94_0                 
  seaborn                        0.13.2      hd8ed1ab_2          conda-forge
  seaborn-base                   0.13.2      pyhd8ed1ab_2        conda-forge
  setuptools                     69.5.1      py39hca03da5_0                 
  six                            1.16.0      pyhd3eb1b0_1                   
  snowballstemmer                2.2.0       pyhd3eb1b0_0                   
  soupsieve                      2.5         py39hca03da5_0                 
  sphinx                         5.0.2       py39hca03da5_0                 
  sphinxcontrib-applehelp        1.0.2       pyhd3eb1b0_0                   
  sphinxcontrib-devhelp          1.0.2       pyhd3eb1b0_0                   
  sphinxcontrib-htmlhelp         2.0.0       pyhd3eb1b0_0                   
  sphinxcontrib-jsmath           1.0.1       pyhd3eb1b0_0                   
  sphinxcontrib-qthelp           1.0.3       pyhd3eb1b0_0                   
  sphinxcontrib-serializinghtml  1.1.5       pyhd3eb1b0_0                   
  sqlite                         3.45.3      h80987f9_0                     
  statsmodels                    0.14.0      py39hbda83bc_0                 
  tapi                           1100.0.11   h8754e6a_1                     
  tk                             8.6.14      h6ba3021_0                     
  tomli                          2.0.1       py39hca03da5_0                 
  toolz                          0.12.0      py39hca03da5_0                 
  tornado                        6.3.3       py39h80987f9_0                 
  tqdm                           4.66.2      py39h33ce5c2_0                 
  typing-extensions              4.11.0      py39hca03da5_0                 
  typing_extensions              4.11.0      py39hca03da5_0                 
  tzdata                         2024a       h04d1e81_0                     
  unicodedata2                   15.1.0      py39h80987f9_0                 
  urllib3                        2.1.0       py39hca03da5_1                 
  wheel                          0.43.0      py39hca03da5_0                 
  xz                             5.4.6       h80987f9_1                     
  yaml                           0.2.5       h1230e6a_0                     
  zipp                           3.17.0      py39hca03da5_0                 
  zlib                           1.2.13      h18a0788_1                     
  zstandard                      0.22.0      py39h1a4646a_0                 
  zstd                           1.5.5       hd90d995_2

Additional Context

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@truemerrill truemerrill added the type::bug describes erroneous operation, use severity::* to classify the type label May 13, 2024
@github-project-automation github-project-automation bot moved this to 🆕 New in 🧭 Planning May 13, 2024
@kenodegard kenodegard added the duplicate indicate issues/PRs that are duplicates of another label May 14, 2024
@kenodegard
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This was previously reported in #3693 and the fix is included in the conda-build 24.5.0 release from earlier today!

@kenodegard kenodegard closed this as not planned Won't fix, can't repro, duplicate, stale May 14, 2024
@github-project-automation github-project-automation bot moved this from 🆕 New to 🏁 Done in 🧭 Planning May 14, 2024
@github-actions github-actions bot added the locked [bot] locked due to inactivity label Nov 10, 2024
@github-actions github-actions bot locked as resolved and limited conversation to collaborators Nov 10, 2024
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