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Graphical Processing Stream

This ensemble of Matlab programs provides an interactive framework for the processing of MEG/EEG data. It uses Freesurfer and MNE. Make sure you have both packages installed and properly instantiated before running GPS: Analysis.

For the purposes of this quick guide, I based it mostly off of mne-python's git page

Get the latest code

To get the latest code using git, simply type:

git clone git@github.com:conradarcturus/GPS.git

Initializing GPS

Run the gps_init.m script in the main folder

Dependencies

  • Matlab
  • Probably a toolbox or two from Matlab
  • MNE
  • Freesurfer

Contact

Alexander Conrad Nied (Lead Developer)
anied@cs.washington.edu
David Gow (Project Manager)
gow@helix.mgh.harvard.edu

Testing Data

The test data set to try out the program is not ready yet, but it will be called WPM (Word Picture Matching)

Licensing

GPS is BSD-licenced (3 clause):

Copyright © 2013, Alexander Conrad Nied All rights reserved.

Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

  • Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
  • Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
  • Neither the names of MNE-Python authors nor the names of any contributors may be used to endorse or promote products derived from this software without specific prior written permission.

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.