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Update build system to handle environment variables at compilation ti… #1410

Update build system to handle environment variables at compilation ti…

Update build system to handle environment variables at compilation ti… #1410

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2 errors and 1 warning

Test (3.8, windows, pip, types-c, empty), Install C = true

failed May 10, 2024 in 8m 56s
Set up job
10s
Set test-flags1
0s
Set test-flags2
0s
Run actions/checkout@v4
21s
Get tags required by setuptools_scm to generate version
25s
Set C installation based on matrix value
0s
Set MPI installation based on matrix value
0s
Set SBML installation based on matrix value
0s
Set R installation based on matrix value
0s
Set Pytorch installation based on matrix value
0s
Store an ID string for the job
0s
(WINDOWS) Patch TEMP/TMPDIR on Windows
1s
(WINDOWS) Disable interpreted language example on Windows for speed
0s
(WINDOWS,PIP) Set up MSVC Compiler
3s
(WINDOWS,PIP) Set up MSMPI
8s
(LINUX,PIP) Cache pip
0s
(MACOS,PIP) Cache pip
0s
(WINDOWS,PIP) Cache pip
4s
(PIP) Set up Python
0s
(PIP) Set up Python 3.7
0s
(PIP) Set up Julia
14s
Set up Matlab
0s
(PIP) Set up Virtual Env
0s
(PIP) Install dependencies & package
7m 17s
(WINDOWS,PIP) Set the vcpkg root config value
0s
(WINDOWS,PIP) Update R requirements
0s
(MACOS,PIP) Set C compiler to llvm clang
0s
(WINDOWS,CONDA) Prune the PATH variable
0s
(CONDA) Set up miniconda base environment
0s
(WINDOWS,CONDA) Set up MSVC Compiler
0s
(CONDA) Build package in base environment
0s
(CONDA) Build package in base environment (re-attempt)
0s
(MACOS,CONDA) Install old MacOSX SDK for compatibility with the conda llvm (7)
0s
(LINUX) Install ncurses 5 for SBML runs with libroadrunner
0s
(CONDA) Install dependencies & package from existing build
0s
(CONDA) Install dependencies & package from existing build (re-attempt)
0s
(MACOS,CONDA) Set allow_multiple_omp config
0s
Verify installation
0s
Compile libraries
0s
Run cmake test in command prompt (CONDA)
0s
Run cmake test in command prompt (PIP)
0s
Run tests (1st)
0s
Re-run test failures (1st)
0s
Run generated test script (1st)
0s
Re-run test script failures (1st)
0s
Run tests (2nd)
0s
Re-run test failures (2nd)
0s
Run generated test script (2nd)
0s
Re-run test script failures (2nd)
0s
Combine coverage reports
0s
(CONDA) Generate XML version of coverage report
0s
Upload coverage report
0s
Download the last successful workflow environment log
3s
Create a log of Python package versions
1s
Run actions/upload-artifact@v4
0s
Post (PIP) Set up Python
0s
Post (WINDOWS,PIP) Cache pip
0s
Post Run actions/checkout@v4
2s
Complete job
0s