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args.json
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{
"F": 1,
"T": 25,
"aa_composition": null,
"aa_spec": null,
"aa_weight": null,
"aa_weights_json": null,
"add_weight_every_n": 1,
"argmax_seq": false,
"cautious": false,
"checkpoint": null,
"clamp_seqout": false,
"contigs": [
"0"
],
"d_t1d": 24,
"dssp_pdb": null,
"dump_all": false,
"dump_npz": false,
"dump_pdb": true,
"dump_trb": true,
"frac_seq_to_weight": 0.0,
"hal_idx": null,
"helix_bias": 0.0,
"hotspots": null,
"idx_rf": null,
"inpaint_seq": null,
"inpaint_seq_tensor": null,
"inpaint_str": null,
"inpaint_str_tensor": null,
"input_json": null,
"length": null,
"loop_bias": 0.0,
"loop_design": false,
"min_decoding_distance": 15,
"multi_templates": null,
"multi_tmpl_conf": null,
"n_cycle": 4,
"noise_schedule": "sqrt",
"num_designs": 500,
"one_weight_per_position": false,
"out": "./tmp/swtichtest",
"pdb": null,
"potential_scale": null,
"ref_idx": null,
"sampling_temp": 1.0,
"save_all_steps": false,
"save_best_plddt": true,
"save_seqs": false,
"scheduled_str_cond": false,
"secondary_structure": "",
"softmax_seqout": false,
"start_num": 0,
"strand_bias": 0.0,
"struc_cond_sc": false,
"symmetry": 1,
"symmetry_cap": 0,
"temperature": 0.1,
"tmpl_conf": "1",
"trb": null,
"sample_distribution": "normal",
"sample_distribution_gmm_means": [
0
],
"sample_distribution_gmm_variances": [
1
],
"target_charge": -10,
"charge_loss_type": "complex",
"target_pH": 7.4,
"hydrophobic_score": -10,
"hydrophobic_loss_type": "complex",
"save_args": false,
"potentials": null,
"sequence": "",
"sampler": "default"
}