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Log file attached, happy to share an NWB file as well
2024.06.28-16.32.23Z-29228.log
My subject is of the CElegansSubject variety, and has a sex of XX
CElegansSubject
sex
XX
This is all allowed by the NWB Inspector and dandi validate passes without issue
dandi validate
Even using dandi upload --validation ignore or skip does not allow upload either
dandi upload --validation ignore
skip
The text was updated successfully, but these errors were encountered:
The main part of the traceback from the log file
Traceback (most recent call last): File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\upload.py", line 346, in process_path metadata = dfile.get_metadata( ^^^^^^^^^^^^^^^^^^^ File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\files\bases.py", line 484, in get_metadata metadata = nwb2asset(self.filepath, digest=digest) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\metadata\nwb.py", line 150, in nwb2asset asset_md = prepare_metadata(metadata) ^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\metadata\core.py", line 76, in prepare_metadata return extract_model(models.BareAsset, metadata) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\metadata\util.py", line 511, in extract_model value = kwargs.get(field, extract_field(field, metadata)) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\metadata\util.py", line 628, in extract_field return FIELD_EXTRACTORS[field](metadata) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\metadata\util.py", line 522, in func m = extract_model( ^^^^^^^^^^^^^^ File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\metadata\util.py", line 511, in extract_model value = kwargs.get(field, extract_field(field, metadata)) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\metadata\util.py", line 628, in extract_field return FIELD_EXTRACTORS[field](metadata) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Users\theac\anaconda3\envs\dandi_3_12_created_6_28_2024\Lib\site-packages\dandi\metadata\util.py", line 308, in extract_sex raise ValueError(f"Cannot interpret sex field: {value}") ValueError: Cannot interpret sex field: xx
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Log file attached, happy to share an NWB file as well
2024.06.28-16.32.23Z-29228.log
My subject is of the
CElegansSubject
variety, and has asex
ofXX
This is all allowed by the NWB Inspector and
dandi validate
passes without issueEven using
dandi upload --validation ignore
orskip
does not allow upload eitherThe text was updated successfully, but these errors were encountered: