-
Notifications
You must be signed in to change notification settings - Fork 8
/
bio-svgenes.gemspec
256 lines (251 loc) · 10.4 KB
/
bio-svgenes.gemspec
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
# Generated by jeweler
# DO NOT EDIT THIS FILE DIRECTLY
# Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
# -*- encoding: utf-8 -*-
Gem::Specification.new do |s|
s.name = "bio-svgenes"
s.version = "0.4.1"
s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
s.authors = ["Dan MacLean"]
s.date = "2014-01-06"
s.description = "This bio-gem facilitates the creation of pretty, publication quality SVG images from feature data."
s.email = "maclean.daniel@gmail.com"
s.extra_rdoc_files = [
"LICENSE.txt",
"README.md"
]
s.files = [
".document",
"Gemfile",
"Gemfile.lock",
"LICENSE.txt",
"README.md",
"Rakefile",
"VERSION",
"bio-svgenes.gemspec",
"doc/Bio.html",
"doc/Bio/Graphics.html",
"doc/Bio/Graphics/Glyph.html",
"doc/Bio/Graphics/MiniFeature.html",
"doc/Bio/Graphics/Page.html",
"doc/Bio/Graphics/Primitive.html",
"doc/Bio/Graphics/SVGEE.html",
"doc/Bio/Graphics/Track.html",
"doc/LICENSE_txt.html",
"doc/classes/Bio.html",
"doc/classes/Bio/Graphics.html",
"doc/classes/Bio/Graphics/Glyph.html",
"doc/classes/Bio/Graphics/Glyph.src/M000001.html",
"doc/classes/Bio/Graphics/Glyph.src/M000002.html",
"doc/classes/Bio/Graphics/Glyph.src/M000003.html",
"doc/classes/Bio/Graphics/Glyph.src/M000004.html",
"doc/classes/Bio/Graphics/Glyph.src/M000005.html",
"doc/classes/Bio/Graphics/Glyph.src/M000006.html",
"doc/classes/Bio/Graphics/Glyph.src/M000007.html",
"doc/classes/Bio/Graphics/Glyph.src/M000008.html",
"doc/classes/Bio/Graphics/Glyph.src/M000009.html",
"doc/classes/Bio/Graphics/Glyph.src/M000010.html",
"doc/classes/Bio/Graphics/Glyph.src/M000011.html",
"doc/classes/Bio/Graphics/Glyph.src/M000012.html",
"doc/classes/Bio/Graphics/Glyph.src/M000013.html",
"doc/classes/Bio/Graphics/Glyph.src/M000014.html",
"doc/classes/Bio/Graphics/Glyph.src/M000015.html",
"doc/classes/Bio/Graphics/Glyph.src/M000016.html",
"doc/classes/Bio/Graphics/Glyph.src/M000017.html",
"doc/classes/Bio/Graphics/Glyph.src/M000018.html",
"doc/classes/Bio/Graphics/Glyph.src/M000019.html",
"doc/classes/Bio/Graphics/Glyph.src/M000020.html",
"doc/classes/Bio/Graphics/Glyph.src/M000021.html",
"doc/classes/Bio/Graphics/Glyph.src/M000022.html",
"doc/classes/Bio/Graphics/Glyph.src/M000023.html",
"doc/classes/Bio/Graphics/Glyph.src/M000024.html",
"doc/classes/Bio/Graphics/MiniFeature.html",
"doc/classes/Bio/Graphics/MiniFeature.src/M000001.html",
"doc/classes/Bio/Graphics/MiniFeature.src/M000003.html",
"doc/classes/Bio/Graphics/MiniFeature.src/M000024.html",
"doc/classes/Bio/Graphics/Page.html",
"doc/classes/Bio/Graphics/Page.src/M000010.html",
"doc/classes/Bio/Graphics/Page.src/M000011.html",
"doc/classes/Bio/Graphics/Page.src/M000012.html",
"doc/classes/Bio/Graphics/Page.src/M000013.html",
"doc/classes/Bio/Graphics/Page.src/M000014.html",
"doc/classes/Bio/Graphics/Page.src/M000015.html",
"doc/classes/Bio/Graphics/Page.src/M000016.html",
"doc/classes/Bio/Graphics/Page.src/M000017.html",
"doc/classes/Bio/Graphics/Page.src/M000018.html",
"doc/classes/Bio/Graphics/Page.src/M000019.html",
"doc/classes/Bio/Graphics/Page.src/M000020.html",
"doc/classes/Bio/Graphics/Page.src/M000021.html",
"doc/classes/Bio/Graphics/Page.src/M000022.html",
"doc/classes/Bio/Graphics/Page.src/M000023.html",
"doc/classes/Bio/Graphics/Page.src/M000024.html",
"doc/classes/Bio/Graphics/Page.src/M000025.html",
"doc/classes/Bio/Graphics/Page.src/M000026.html",
"doc/classes/Bio/Graphics/Page.src/M000027.html",
"doc/classes/Bio/Graphics/Page.src/M000028.html",
"doc/classes/Bio/Graphics/Page.src/M000029.html",
"doc/classes/Bio/Graphics/Page.src/M000030.html",
"doc/classes/Bio/Graphics/Page.src/M000031.html",
"doc/classes/Bio/Graphics/Page.src/M000032.html",
"doc/classes/Bio/Graphics/Page.src/M000033.html",
"doc/classes/Bio/Graphics/Page.src/M000034.html",
"doc/classes/Bio/Graphics/Page.src/M000035.html",
"doc/classes/Bio/Graphics/Page.src/M000036.html",
"doc/classes/Bio/Graphics/Page.src/M000037.html",
"doc/classes/Bio/Graphics/Page.src/M000038.html",
"doc/classes/Bio/Graphics/Page.src/M000039.html",
"doc/classes/Bio/Graphics/Page.src/M000040.html",
"doc/classes/Bio/Graphics/Page.src/M000041.html",
"doc/classes/Bio/Graphics/Page.src/M000042.html",
"doc/classes/Bio/Graphics/Page.src/M000043.html",
"doc/classes/Bio/Graphics/Page.src/M000044.html",
"doc/classes/Bio/Graphics/Primitive.html",
"doc/classes/Bio/Graphics/Primitive.src/M000001.html",
"doc/classes/Bio/Graphics/Primitive.src/M000002.html",
"doc/classes/Bio/Graphics/Primitive.src/M000008.html",
"doc/classes/Bio/Graphics/Primitive.src/M000009.html",
"doc/classes/Bio/Graphics/Primitive.src/M000022.html",
"doc/classes/Bio/Graphics/Primitive.src/M000023.html",
"doc/classes/Bio/Graphics/SVGEE.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000002.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000003.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000004.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000005.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000006.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000007.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000008.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000009.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000016.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000017.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000018.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000019.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000020.html",
"doc/classes/Bio/Graphics/SVGEE.src/M000021.html",
"doc/classes/Bio/Graphics/Track.html",
"doc/classes/Bio/Graphics/Track.src/M000001.html",
"doc/classes/Bio/Graphics/Track.src/M000002.html",
"doc/classes/Bio/Graphics/Track.src/M000003.html",
"doc/classes/Bio/Graphics/Track.src/M000004.html",
"doc/classes/Bio/Graphics/Track.src/M000010.html",
"doc/classes/Bio/Graphics/Track.src/M000011.html",
"doc/classes/Bio/Graphics/Track.src/M000012.html",
"doc/classes/Bio/Graphics/Track.src/M000013.html",
"doc/created.rid",
"doc/files/lib/bio-svgenes_rb.html",
"doc/files/lib/bio/graphics/glyph_rb.html",
"doc/files/lib/bio/graphics/mini_feature_rb.html",
"doc/files/lib/bio/graphics/page_rb.html",
"doc/files/lib/bio/graphics/primitive_rb.html",
"doc/files/lib/bio/graphics/svgee_rb.html",
"doc/files/lib/bio/graphics/track_rb.html",
"doc/fr_class_index.html",
"doc/fr_file_index.html",
"doc/fr_method_index.html",
"doc/images/add.png",
"doc/images/arrow_up.png",
"doc/images/brick.png",
"doc/images/brick_link.png",
"doc/images/bug.png",
"doc/images/bullet_black.png",
"doc/images/bullet_toggle_minus.png",
"doc/images/bullet_toggle_plus.png",
"doc/images/date.png",
"doc/images/delete.png",
"doc/images/find.png",
"doc/images/loadingAnimation.gif",
"doc/images/macFFBgHack.png",
"doc/images/package.png",
"doc/images/page_green.png",
"doc/images/page_white_text.png",
"doc/images/page_white_width.png",
"doc/images/plugin.png",
"doc/images/ruby.png",
"doc/images/tag_blue.png",
"doc/images/tag_green.png",
"doc/images/transparent.png",
"doc/images/wrench.png",
"doc/images/wrench_orange.png",
"doc/images/zoom.png",
"doc/index.html",
"doc/js/darkfish.js",
"doc/js/jquery.js",
"doc/js/navigation.js",
"doc/js/search.js",
"doc/js/search_index.js",
"doc/js/searcher.js",
"doc/manual/bootstrap/css/bootstrap-responsive.css",
"doc/manual/bootstrap/css/bootstrap-responsive.min.css",
"doc/manual/bootstrap/css/bootstrap.css",
"doc/manual/bootstrap/css/bootstrap.min.css",
"doc/manual/bootstrap/img/glyphicons-halflings-white.png",
"doc/manual/bootstrap/img/glyphicons-halflings.png",
"doc/manual/bootstrap/js/bootstrap.js",
"doc/manual/bootstrap/js/bootstrap.min.js",
"doc/manual/img/circle.png",
"doc/manual/img/directed.png",
"doc/manual/img/down_triangle.png",
"doc/manual/img/histogram.png",
"doc/manual/img/span.png",
"doc/manual/img/transcript.png",
"doc/manual/img/up_triangle.png",
"doc/manual/manual.html",
"doc/manual/manual.md",
"doc/rdoc-style.css",
"doc/rdoc.css",
"doc/table_of_contents.html",
"examples/data.txt",
"examples/draw_from_json.rb",
"examples/example.rb",
"examples/example.svg",
"examples/example2.rb",
"examples/example_config.json",
"examples/gene.gff",
"examples/transcripts.gff",
"lib/bio-svgenes.rb",
"lib/bio/graphics/glyph.rb",
"lib/bio/graphics/mini_feature.rb",
"lib/bio/graphics/page.rb",
"lib/bio/graphics/primitive.rb",
"lib/bio/graphics/svgee.rb",
"lib/bio/graphics/track.rb",
"test/helper.rb",
"test/json_config.json",
"test/test_glyph.rb",
"test/test_mini_feature.rb",
"test/test_page.rb",
"test/test_primitive.rb",
"test/test_svgee.rb",
"test/test_track.rb",
"test/test_transcripts.gff"
]
s.homepage = "http://github.com/danmaclean/bioruby-svgenes"
s.licenses = ["MIT"]
s.require_paths = ["lib"]
s.rubygems_version = "1.8.25"
s.summary = "Create pretty SVG-format images of features, gene models and data tracks"
if s.respond_to? :specification_version then
s.specification_version = 3
if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
s.add_development_dependency(%q<shoulda>, [">= 0"])
s.add_development_dependency(%q<bundler>, [">= 1.0.0"])
s.add_development_dependency(%q<jeweler>, ["~> 1.6.4"])
s.add_development_dependency(%q<rcov>, [">= 0"])
s.add_development_dependency(%q<bio>, [">= 1.4.2"])
s.add_development_dependency(%q<json>, [">= 1.7"])
else
s.add_dependency(%q<shoulda>, [">= 0"])
s.add_dependency(%q<bundler>, [">= 1.0.0"])
s.add_dependency(%q<jeweler>, ["~> 1.6.4"])
s.add_dependency(%q<rcov>, [">= 0"])
s.add_dependency(%q<bio>, [">= 1.4.2"])
s.add_dependency(%q<json>, [">= 1.7"])
end
else
s.add_dependency(%q<shoulda>, [">= 0"])
s.add_dependency(%q<bundler>, [">= 1.0.0"])
s.add_dependency(%q<jeweler>, ["~> 1.6.4"])
s.add_dependency(%q<rcov>, [">= 0"])
s.add_dependency(%q<bio>, [">= 1.4.2"])
s.add_dependency(%q<json>, [">= 1.7"])
end
end