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62 | 62 | "| Firing rate (Hz) | Total number of spikes per second. |\n", |
63 | 63 | "| Signal-to-noise ratio | Ratio of the maximum amplitude of the mean spike waveform to the standard deviation of the background noise on a given channel. |\n", |
64 | 64 | "| Presence ratio | Proportion of time during a session that a unit is spiking, ranging from 0 to 0.99. |\n", |
65 | | - "| Interspike interval (ISI) violation | Rate of ISI violation as a fraction of overall rate. |\n", |
| 65 | + "| Interspike interval (ISI) violation | Rate of inter-spike-interval (ISI) refractory period violations. |\n", |
66 | 66 | "| Number violation | Total number of ISI violations. |\n", |
67 | 67 | "| Amplitude cut-off | False negative rate of a unit measured by the degree to which its distribution of spike amplitudes is truncated, indicating the fraction of missing spikes. An amplitude cutoff of 0.1 indicates approximately 10% missing spikes. |\n", |
68 | 68 | "| Isolation distance | A metric that uses the principal components (PCs) of a unit's waveforms, which are projected into a lower-dimensional PC space after spike sorting. This quantifies how well-isolated the unit is from other potential clusters. |\n", |
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72 | 72 | "| Nearest-neighbors miss rate | The proportion of its nearest neighbors that do not belong to the same given cluster based on its first principal components. |\n", |
73 | 73 | "| Silhouette score | The ratio between cohesiveness of a cluster (distance between member spikes) and its separation from other clusters (distance to non-member spikes). |\n", |
74 | 74 | "| Max drift | The maximum shift in spike location, calculated as the center of mass of the energy of the first principal component score. |\n", |
| 75 | + "| Cumulative drift | The cumulative change in spike position throughout a recording. |\n", |
75 | 76 | "\n", |
76 | 77 | "For further details of the quality metrics, please see:\n", |
77 | 78 | "- [Allen Institute Documentation](https://allensdk.readthedocs.io/en/latest/_static/examples/nb/ecephys_quality_metrics.html)\n", |
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