workflows.yml

---
options:
  global: ""  # used once at the end of the command
  local:      # used for every workflow
    - "-b"
    - "--configuration json://$JSON"
    - "--aod-memory-rate-limit 2000000000"
    - "--shm-segment-size 16000000000"
    - "--resources-monitoring 2"
    - "--min-failure-level error"

workflows:
  # dummy workflow with the full list of options
  o2-analysis-workflow:
    executable: o2-analysis-workflow  # workflow command, if different from the dictionary node name above
    dependencies: []  # dictionary nodes that this workflow needs as direct dependencies (format: str, list)
    requires_mc: no  # yes/no whether the workflow can only run on MC or not
    options: "--option"  # command line options (format: str, list), see more detailed format below
    # options:
    #   default: ""
    #   real: ""
    #   mc: "--doMC"
    tables: []  # descriptions of tables to be saved in the output tree (format: str, list), see more detailed format below
    # tables:
    #   default: []
    #   real: []
    #   mc: []

  # Skimming

  o2-analysis-hf-track-index-skim-creator: &skim_creator
    executable: o2-analysis-hf-track-index-skim-creator
    dependencies:
      - o2-analysis-track-dca_runX
      - o2-analysis-trackselection_runX
      - o2-analysis-track-to-collision-associator
    tables: [HF2PRONG/1, HF3PRONG/1, HFCASCADE/1, HFCASCLF2PRONG, HFCASCLF3PRONG, HFCUTSTATUS2P, HFCUTSTATUS3P, HFPVREFIT2PRONG, HFPVREFIT3PRONG, HFPVREFITTRACK, HFSELCOLLISION, HFSELTRACK]

  o2-analysis-hf-track-index-skim-creator_v0:
    <<: *skim_creator
    dependencies:
      - o2-analysis-track-dca_runX
      - o2-analysis-trackselection_runX
      - o2-analysis-track-to-collision-associator
      - o2-analysis-lf-lambdakzerobuilder

  # Candidate creators

  o2-analysis-hf-candidate-creator-2prong: &cand_creator_2p
    executable: o2-analysis-hf-candidate-creator-2prong
    dependencies: o2-analysis-hf-track-index-skim-creator_skimX
    tables:
      default: [HFCAND2PBASE, HFCAND2PEXT]
      mc: [HFCAND2PMCREC, HFCAND2PMCGEN]

  o2-analysis-hf-candidate-creator-2prong_derived:
    <<: *cand_creator_2p
    dependencies: o2-analysis-track-dca_runX

  o2-analysis-hf-candidate-creator-3prong: &cand_creator_3p
    executable: o2-analysis-hf-candidate-creator-3prong
    dependencies: o2-analysis-hf-track-index-skim-creator_skimX
    tables:
      default: [HFCAND3PBASE, HFCAND3PEXT]
      mc: [HFCAND3PMCREC, HFCAND3PMCGEN]

  o2-analysis-hf-candidate-creator-3prong_derived:
    <<: *cand_creator_3p
    dependencies: o2-analysis-track-dca_runX

  o2-analysis-hf-candidate-creator-dstar: {}

  o2-analysis-hf-candidate-creator-cascade:
    dependencies: o2-analysis-hf-track-index-skim-creator_skimX
    tables:
      default: [HFCANDCASCBASE, HFCANDCASCEXT]
      mc: [HFCANDCASCMCREC, HFCANDCASCMCGEN]

  o2-analysis-hf-candidate-creator-x:
    dependencies: o2-analysis-hf-candidate-selector-jpsi_runX
    tables:
      default: [HFCANDXBASE, HFCANDXEXT]
      mc: [HFCANDXMCREC, HFCANDXMCGEN]

  o2-analysis-hf-candidate-creator-xicc:
    dependencies: o2-analysis-hf-candidate-selector-xic-to-p-k-pi
    requires_mc: yes
    options:
      mc: "--doMC"
    tables:
      default: [HFCANDXICCBASE, HFCANDXICCEXT]
      mc: [HFCANDXICCMCREC, HFCANDXICCMCGEN]

  o2-analysis-hf-candidate-creator-chic:
    dependencies: o2-analysis-hf-candidate-selector-jpsi_runX
    tables:
      default: [HFCANDCHICBASE, HFCANDCHICEXT]
      mc: [HFCANDCHICMCREC, HFCANDCHICMCGEN]

  o2-analysis-hf-candidate-creator-b0:
    dependencies: o2-analysis-hf-candidate-selector-dplus-to-pi-k-pi
    tables:
      default: [HFCANDB0BASE, HFCANDB0EXT]
      mc: [HFCANDB0MCREC, HFCANDB0MCGEN]

  o2-analysis-hf-candidate-creator-bplus:
    dependencies: o2-analysis-hf-candidate-selector-d0
    tables:
      default: [HFCANDBPLUSBASE, HFCANDBPLUSEXT]
      mc: [HFCANDBPMCREC, HFCANDBPMCGEN]

  o2-analysis-hf-candidate-creator-lb:
    dependencies: o2-analysis-hf-candidate-selector-lc
    tables:
      default: [HFCANDLB, HFCANDLBEXT]
      mc: [HFCANDLBMCREC, HFCANDLBMCGEN]

  # Selectors

  o2-analysis-hf-candidate-selector-d0: &selector_2prong
    dependencies:
      - o2-analysis-hf-candidate-creator-2prong_derX
      - o2-analysis-pid-tpc-full
      - o2-analysis-pid-tof-full_runX
    tables: HFSELD0

  o2-analysis-hf-candidate-selector-jpsi_run3: &selector_jpsi
    <<: *selector_2prong
    executable: o2-analysis-hf-candidate-selector-jpsi
    tables: HFSELJPSI

  o2-analysis-hf-candidate-selector-jpsi_run2:
    <<: *selector_jpsi

  o2-analysis-hf-candidate-selector-jpsi_run5:
    <<: *selector_jpsi
    options: --isAlice3

  o2-analysis-hf-candidate-selector-dplus-to-pi-k-pi: &selector_3prong
    dependencies:
      - o2-analysis-hf-candidate-creator-3prong_derX
      - o2-analysis-pid-tpc-full
      - o2-analysis-pid-tof-full_runX
    tables: HFSELDPLUS

  o2-analysis-hf-candidate-selector-ds-to-k-k-pi:
    <<: *selector_3prong
    tables: HFSELDS

  o2-analysis-hf-candidate-selector-lb-to-lc-pi:
    dependencies: o2-analysis-hf-candidate-creator-lb
    tables: HFSELLB

  o2-analysis-hf-candidate-selector-lc:
    dependencies:
      - o2-analysis-hf-candidate-creator-3prong_derX
      - o2-analysis-pid-tpc-full
      - o2-analysis-pid-tof-full_runX
      - o2-analysis-pid-bayes
    tables: HFSELLC

  o2-analysis-hf-candidate-selector-xic-to-p-k-pi:
    <<: *selector_3prong
    tables: HFSELXIC

  o2-analysis-hf-candidate-selector-lc-to-k0s-p:
    dependencies:
      - o2-analysis-hf-candidate-creator-cascade
      - o2-analysis-pid-tpc-full
      - o2-analysis-pid-tof-full_runX
      - o2-analysis-pid-bayes
    tables: HFSELLCK0SP

  o2-analysis-hf-candidate-selector-x-to-jpsi-pi-pi:
    dependencies: o2-analysis-hf-candidate-creator-x
    tables: HFSELX

  o2-analysis-hf-candidate-selector-xicc-to-p-k-pi-pi:
    dependencies: o2-analysis-hf-candidate-creator-xicc
    requires_mc: yes
    tables: HFSELXICC

  o2-analysis-hf-candidate-selector-chic-to-jpsi-gamma:
    dependencies: o2-analysis-hf-candidate-creator-chic
    tables: HFSELCHIC

  o2-analysis-hf-candidate-selector-b0-to-d-pi:
    dependencies: o2-analysis-hf-candidate-creator-b0
    tables: HFSELB0

  o2-analysis-hf-candidate-selector-bplus-to-d0-pi:
    dependencies: o2-analysis-hf-candidate-creator-bplus
    tables: HFSELBPLUS

  # Analysis tasks

  o2-analysis-hf-task-d0:
    dependencies: o2-analysis-hf-candidate-selector-d0

  o2-analysis-hf-task-jpsi:
    options:
      mc: "--doMC"
    dependencies: o2-analysis-hf-candidate-selector-jpsi_runX

  o2-analysis-hf-task-dplus:
    dependencies: o2-analysis-hf-candidate-selector-dplus-to-pi-k-pi

  o2-analysis-hf-task-ds:
    dependencies: o2-analysis-hf-candidate-selector-ds-to-k-k-pi

  o2-analysis-hf-task-lc:
    dependencies: o2-analysis-hf-candidate-selector-lc

  o2-analysis-hf-task-lb:
    dependencies: [o2-analysis-hf-candidate-selector-lb-to-lc-pi, o2-analysis-centrality_runX]

  o2-analysis-hf-task-xic:
    dependencies: o2-analysis-hf-candidate-selector-xic-to-p-k-pi

  o2-analysis-hf-task-b0:
    dependencies: o2-analysis-hf-candidate-selector-b0-to-d-pi

  o2-analysis-hf-task-bplus:
    dependencies: o2-analysis-hf-candidate-selector-bplus-to-d0-pi

  o2-analysis-hf-task-x:
    options:
      mc: "--doMC"
    dependencies: o2-analysis-hf-candidate-selector-x-to-jpsi-pi-pi

  o2-analysis-hf-task-lc-to-k0s-p:
    dependencies: o2-analysis-hf-candidate-selector-lc-to-k0s-p

  o2-analysis-hf-task-xicc:
    requires_mc: yes
    options:
      mc: "--doMC"
    dependencies: o2-analysis-hf-candidate-selector-xicc-to-p-k-pi-pi

  o2-analysis-hf-task-chic:
    options:
      mc: "--doMC"
    dependencies: o2-analysis-hf-candidate-selector-chic-to-jpsi-gamma

  # Tree creators

  o2-analysis-hf-tree-creator-d0-to-k-pi:
    dependencies: o2-analysis-hf-candidate-selector-d0
    tables: [HFCAND2PFull, HFCAND2PFullE, HFCAND2PFullP]

  o2-analysis-hf-tree-creator-lc-to-p-k-pi:
    dependencies: o2-analysis-hf-candidate-selector-lc
    tables: [HFCAND3PFull, HFCAND3PFullE, HFCAND3PFullP]

  o2-analysis-hf-tree-creator-lc-to-k0s-p:
    dependencies: o2-analysis-hf-candidate-selector-lc-to-k0s-p
    tables: [HFCANDCASCLITE, HFCANDCASCFULL, HFCANDCASCFULLE, HFCANDCASCFULLP]

  o2-analysis-hf-tree-creator-bplus-to-d0-pi:
    requires_mc: yes
    dependencies: o2-analysis-hf-candidate-selector-bplus-to-d0-pi
    tables: [HFCANDBPFull, HFCANDBPFullE, HFCANDBPFullP]

  o2-analysis-hf-tree-creator-lb-to-lc-pi:
    requires_mc: yes
    dependencies: o2-analysis-hf-candidate-selector-lb-to-lc-pi
    tables: [HFCANDLbFull, HFCANDLbFullE, HFCANDLbFullP]

  o2-analysis-hf-tree-creator-x-to-jpsi-pi-pi:
    requires_mc: yes
    dependencies: o2-analysis-hf-candidate-selector-x-to-jpsi-pi-pi
    tables: [HFCANDXFull, HFCANDXFullE, HFCANDXFullP]

  o2-analysis-hf-tree-creator-xicc-to-p-k-pi-pi:
    requires_mc: yes
    dependencies: o2-analysis-hf-candidate-selector-xicc-to-p-k-pi-pi
    tables: [HFCANDXiccFull, HFCANDXiccFullE, HFCANDXiccFullP]

  o2-analysis-hf-tree-creator-chic-to-jpsi-gamma:
    requires_mc: yes
    dependencies: o2-analysis-hf-candidate-selector-chic-to-jpsi-gamma
    tables: [HFCANDChicFull, HFCANDChicFullE, HFCANDChicFullP]

  # D meson correlations

  o2-analysis-hf-correlator-d0-d0bar: &d0d0barcorr
    executable: o2-analysis-hf-correlator-d0-d0bar
    dependencies: o2-analysis-hf-candidate-selector-d0
    tables: [DDBARPAIR, DDBARRECOINFO]

  o2-analysis-hf-correlator-d0-d0bar_mc-rec:
    <<: *d0d0barcorr
    options: "--doMCRec"

  o2-analysis-hf-correlator-d0-d0bar_mc-gen:
    <<: *d0d0barcorr
    options: "--doMCGen"
    tables: DDBARPAIR

  o2-analysis-hf-correlator-dplus-dminus: &dplusdminus
    executable: o2-analysis-hf-correlator-dplus-dminus
    dependencies: o2-analysis-hf-candidate-selector-dplus-to-pi-k-pi
    tables: [DDBARPAIR, DDBARRECOINFO]

  o2-analysis-hf-correlator-dplus-dminus_mc-rec:
    <<: *dplusdminus
    requires_mc: yes

  o2-analysis-hf-correlator-dplus-dminus_mc-gen:
    <<: *dplusdminus
    requires_mc: yes
    tables: DDBARPAIR

  o2-analysis-hf-correlator-d0-hadrons:
    dependencies: o2-analysis-hf-candidate-selector-d0
    tables: [DHADRONPAIR, DHADRONRECOINFO]

  o2-analysis-hf-correlator-dplus-hadrons:
    dependencies: o2-analysis-hf-candidate-selector-dplus-to-pi-k-pi

  o2-analysis-hf-correlator-ds-hadrons:
    dependencies: o2-analysis-hf-candidate-selector-ds-to-k-k-pi

  o2-analysis-hf-task-correlation-d-dbar: &taskddbar
    executable: o2-analysis-hf-task-correlation-d-dbar

  o2-analysis-hf-task-correlation-d-dbar_mc-rec:
    <<: *taskddbar
    requires_mc: yes

  o2-analysis-hf-task-correlation-d-dbar_mc-gen:
    <<: *taskddbar
    requires_mc: yes

  o2-analysis-hf-task-correlation-d0-hadrons:
    dependencies: o2-analysis-hf-correlator-d0-hadrons

  o2-analysis-hf-task-flow:
    dependencies:
      - o2-analysis-hf-candidate-selector-d0
      - o2-analysis-multiplicity-table_runX

  # Jets

  o2-analysis-je-jet-finder-d0-data-charged: &jethf
    dependencies: [o2-analysis-event-selection, o2-analysis-hf-candidate-selector-d0]
    tables: [D0JET, D0JETCONSTS, D0JETCONSTSUB]

  o2-analysis-je-jet-finder-d0-mcd-charged:
    <<: *jethf
    requires_mc: yes
    tables: [D0DJET, D0DJETCONSTS, D0DJETCONSTSUB]

  o2-analysis-je-jet-finder-d0-mcp-charged:
    <<: *jethf
    requires_mc: yes
    tables: [D0PJET, D0PJETCONSTS, D0PJETCONSTSUB]

  o2-analysis-je-jet-finder-hf-qa_data:
    executable: o2-analysis-je-jet-finder-hf-qa
    dependencies: o2-analysis-je-jet-finder-d0-data-charged

  o2-analysis-je-jet-finder-hf-qa_mc:
    executable: o2-analysis-je-jet-finder-hf-qa
    dependencies: [o2-analysis-je-jet-finder-d0-mcd-charged, o2-analysis-je-jet-finder-d0-mcp-charged]
    requires_mc: yes

  o2-analysis-je-jet-matching:
    dependencies: [o2-analysis-je-jet-finder-d0-mcd-charged, o2-analysis-je-jet-finder-d0-mcp-charged]
    requires_mc: yes
    tables: [D0JETMP2D, D0JETMD2P]

  o2-analysis-je-jet-substructure-hf_data:
    executable: o2-analysis-je-jet-substructure-hf
    dependencies: [o2-analysis-hf-candidate-selector-d0, o2-analysis-je-jet-finder-d0-data-charged]
    tables: D0SS

  o2-analysis-je-jet-substructure-hf_mcd:
    executable: o2-analysis-je-jet-substructure-hf
    dependencies: [o2-analysis-hf-candidate-selector-d0, o2-analysis-je-jet-finder-d0-mcd-charged]
    requires_mc: yes
    tables: D0MCDSS

  o2-analysis-je-jet-substructure-hf_mcp:
    executable: o2-analysis-je-jet-substructure-hf
    dependencies: [o2-analysis-hf-candidate-selector-d0, o2-analysis-je-jet-finder-d0-mcp-charged]
    requires_mc: yes
    tables: D0MCPSS

  o2-analysis-je-jet-substructure-hf-output_data:
    executable: o2-analysis-je-jet-substructure-hf-output
    dependencies: o2-analysis-je-jet-substructure-hf_data
    tables: [D0O, D0SSO]

  o2-analysis-je-jet-substructure-hf-output_mcd:
    executable: o2-analysis-je-jet-substructure-hf-output
    dependencies: o2-analysis-je-jet-substructure-hf_mcd
    requires_mc: yes
    tables: [D0MCDO, D0MCDSSO]

  o2-analysis-je-jet-substructure-hf-output_mcp:
    executable: o2-analysis-je-jet-substructure-hf-output
    dependencies: o2-analysis-je-jet-substructure-hf_mcp
    requires_mc: yes
    tables: [D0MCPO, D0MCPSSO]

  # QA

  o2-analysis-qa-efficiency:
    requires_mc: yes
    dependencies: [o2-analysis-event-selection, o2-analysis-trackselection_runX]

  o2-analysis-qa-event-track:
    requires_mc: yes
    dependencies: [o2-analysis-event-selection, o2-analysis-trackselection_runX, o2-analysis-pid-tof-base]

  o2-analysis-hf-task-qa-pid-rejection:
    requires_mc: yes
    dependencies: [o2-analysis-hf-track-index-skim-creator_skimX, o2-analysis-pid-tpc-full, o2-analysis-pid-tof-full_runX]

  o2-analysis-pid-tof-qa-mc:
    requires_mc: yes
    dependencies: [o2-analysis-pid-tof-full_runX, o2-analysis-pid-tof-beta]

  o2-analysis-hf-task-mc-validation:
    requires_mc: yes
    dependencies: [o2-analysis-hf-candidate-creator-2prong_derX, o2-analysis-hf-candidate-creator-3prong_derX]

  # Helper tasks

  o2-analysis-track-to-collision-associator:
    tables: HFTRACKASSOC

  o2-analysis-timestamp: {}

  o2-analysis-trackselection_run2:
    executable: o2-analysis-trackselection
    dependencies: o2-analysis-track-dca_run2

  o2-analysis-trackselection_run3:
    executable: o2-analysis-trackselection
    dependencies: o2-analysis-track-dca_run3

  o2-analysis-trackselection_run5:
    executable: o2-analysis-alice3-trackselection

  o2-analysis-track-dca_run2:
    executable: o2-analysis-trackextension
    dependencies: o2-analysis-timestamp

  o2-analysis-track-dca_run3:
    executable: o2-analysis-track-propagation
    dependencies: o2-analysis-timestamp

  o2-analysis-track-dca_run5:
    executable: o2-analysis-alice3-trackextension

  o2-analysis-centrality_run2:
    executable: o2-analysis-centrality-table

  o2-analysis-centrality_run3:
    executable: o2-analysis-centrality-table

  o2-analysis-centrality_run5:
    executable: o2-analysis-alice3-centrality
    dependencies: o2-analysis-track-dca_run5

  o2-analysis-event-selection:
    dependencies: o2-analysis-timestamp

  o2-analysis-multiplicity-table_run2:
    executable: o2-analysis-multiplicity-table

  o2-analysis-multiplicity-table_run3:
    executable: o2-analysis-multiplicity-table
    dependencies: o2-analysis-event-selection

  o2-analysis-ft0-corrected-table: {}

  # PID

  o2-analysis-pid-tpc-base: {}

  o2-analysis-pid-tpc-full:
    dependencies: [o2-analysis-pid-tpc-base, o2-analysis-timestamp]

  o2-analysis-pid-tof-base_run2:
    executable: o2-analysis-pid-tof-base
    dependencies: o2-analysis-event-selection

  o2-analysis-pid-tof-base_run3:
    executable: o2-analysis-pid-tof-base
    dependencies: [o2-analysis-event-selection, o2-analysis-ft0-corrected-table]

  o2-analysis-pid-tof-full_run2:
    executable: o2-analysis-pid-tof-full
    dependencies: [o2-analysis-pid-tof-base_run2, o2-analysis-timestamp]

  o2-analysis-pid-tof-full_run3:
    executable: o2-analysis-pid-tof-full
    dependencies: [o2-analysis-pid-tof-base_run3, o2-analysis-timestamp]

  o2-analysis-pid-tof-full_run5:
    executable: o2-analysis-alice3-pid-tof

  o2-analysis-pid-bayes:
    dependencies: [o2-analysis-pid-tof-full_runX, o2-analysis-pid-tpc-full, o2-analysis-multiplicity-table_runX]

  o2-analysis-pid-tof-beta: {}

  # Converters

  o2-analysis-mc-converter: {}

  o2-analysis-fdd-converter: {}

  o2-analysis-collision-converter: {}

  o2-analysis-zdc-converter: {}

  o2-analysis-bc-converter: {}

  o2-analysis-tracks-extra-converter: {}

  # LF

  o2-analysis-lf-lambdakzerobuilder:
    dependencies: [o2-analysis-timestamp, o2-analysis-track-dca_runX, o2-analysis-pid-tpc-full]