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unique-kmers: option to stream out sequences #1239

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luizirber opened this issue Aug 10, 2015 · 3 comments
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unique-kmers: option to stream out sequences #1239

luizirber opened this issue Aug 10, 2015 · 3 comments

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@luizirber
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--stream-out option was added on #1053. It is somewhat clear, but not so concise.

Other scripts use -o -, but in unique-kmers context it doesn't sound right, because the output of the script is the # of unique kmers (and it is covered by -R outfile).

Should we stick with it for future scripts, or do we need a better short/long option combination?

@ctb
@mr-c
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mr-c commented Aug 13, 2015

how about --stream-seqs or --stream-records?

@ctb
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ctb commented Aug 14, 2015

On Thu, Aug 13, 2015 at 12:14:00PM -0700, Michael R. Crusoe wrote:

how about --stream-seqs or --stream-records?

+1 stream-records

@luizirber luizirber mentioned this issue Aug 14, 2015
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@mr-c
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mr-c commented Aug 18, 2015

Fixed in #1252

@mr-c mr-c closed this as completed Aug 18, 2015
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@luizirber @ctb @mr-c