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Add a khmer.load function #1716

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luizirber opened this issue May 31, 2017 · 1 comment
Open

Add a khmer.load function #1716

luizirber opened this issue May 31, 2017 · 1 comment

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@luizirber
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Right now we have two functions:

  • khmer.load_countgraph
  • khmer.load_nodegraph

It should be possible to figure out which one is the right one (based on the file headers?) and have one function khmer.load that calls the appropriate function for each data structure.

@standage
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standage commented Jun 1, 2017

Relevant thread: kevlar-dev/kevlar#67.

For now, it should(?) be easy enough to add new ht_types for *table data structures. But just as we're modularizing storage, hash functions, etc, we should consider adding a new field indicating which hash function was used. This would require a major version bump though, so not until we're ready for 3.0.

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