A computational tool for identification of 3D multi-modal spatial neighborhoods.
Under active development
Although not always neccessary, we recommend installing into a fresh environment when possible to avoid installation issues.
conda create -n mushroom -c conda-forge -y python=3.11 jupyter
conda activate mushroom
pip install git+https://github.com/ding-lab/mushroom.gitAPI subject to change...
Registering multi-modal serial section data
Location of materials for Spatial clonal evolution and clone-specific microenvironment interactions within three-dimensional tumor structures