Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

cannot open source file "Python.h" (dependency of "pybind11/pybind11.h") issue even though correct file path is included #10

Open
Sstoica24 opened this issue Sep 11, 2023 · 0 comments

Comments

@Sstoica24
Copy link

Hello,
I am getting a "cannot open source file "Python.h" (dependency of "pybind11/pybind11.h")" or " "#include errors detected. Please update your includePath. Squiggles are disabled" error when I try to #include <pybind11/pybind11.h> in the simple_ml_ext.cpp file even though the correct file path "/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/pybind11/include/pybind11", which is where pybind11.h is located in the terminal (I checked this by doing ls /Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/pybind11/include/pybind11), has been added to the IncludePath settings in VS code, the text editor I am using.

When I try to run the
"!make
!python3 -m pytest -k "softmax_regression_epoch_cpp""
testing cell in hw0.ipynb, I get the following issue:
c++ -O3 -Wall -shared -std=c++11 -fPIC $(python3 -m pybind11 --includes) src/simple_ml_ext.cpp -o src/simple_ml_ext.so
Undefined symbols for architecture x86_64:
"_PyBaseObject_Type", referenced from:
pybind11::detail::make_object_base_type(_typeobject*) in simple_ml_ext-629c88.o
"_PyBuffer_Release", referenced from:
std::_1::enable_if<std::is_void::value, pybind11::detail::void_type>::type pybind11::detail::argument_loader<pybind11::array_t<float, 1>, pybind11::array_t<unsigned char, 1>, pybind11::array_t<float, 1>, float, int>::call<void, pybind11::detail::void_type, pybind11_init_simple_ml_ext(pybind11::module&)::$0&>(pybind11_init_simple_ml_ext(pybind11::module&)::$_0&) && in simple_ml_ext-629c88.o
"_PyByteArray_AsString", referenced from:
bool pybind11::detail::string_caster<std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator>, false>::load_raw(std::__1::enable_if<std::is_same<char, char>::value, pybind11::handle>::type) in simple_ml_ext-629c88.o
"_PyByteArray_Size", referenced from:
bool pybind11::detail::string_caster<std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator>, false>::load_raw(std::__1::enable_if<std::is_same<char, char>::value, pybind11::handle>::type) in simple_ml_ext-629c88.o
"_PyByteArray_Type", referenced from:
bool pybind11::detail::string_caster<std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator>, false>::load_raw(std::__1::enable_if<std::is_same<char, char>::value, pybind11::handle>::type) in simple_ml_ext-629c88.o
"_PyBytes_AsString", referenced from:
bool pybind11::detail::string_caster<std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator>, false>::load_raw(std::__1::enable_if<std::is_same<char, char>::value, pybind11::handle>::type) in simple_ml_ext-629c88.o
"_PyBytes_AsStringAndSize", referenced from:
pybind11::detail::error_fetch_and_normalize::format_value_and_trace() const in simple_ml_ext-629c88.o
pybind11::str::operator std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator>() const in simple_ml_ext-629c88.o
"_PyBytes_Size", referenced from:
bool pybind11::detail::string_caster<std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator>, false>::load_raw(std::__1::enable_if<std::is_same<char, char>::value, pybind11::handle>::type) in simple_ml_ext-629c88.o
"_PyCFunction_Type", referenced from:
pybind11::cpp_function::initialize_generic(std::__1::unique_ptr<pybind11::detail::function_record, pybind11::cpp_function::InitializingFunctionRecordDeleter>&&, char const*, std::type_info const* const*, unsigned long) in simple_ml_ext-629c88.o
"_PyCMethod_New", referenced from:
pybind11::cpp_function::initialize_generic(std::__1::unique_ptr<pybind11::detail::function_record, pybind11::cpp_function::InitializingFunctionRecordDeleter>&&, char const*, std::type_info const* const*, unsigned long) in simple_ml_ext-629c88.o
"_PyCapsule_GetContext", referenced from:
pybind11::capsule::initialize_with_void_ptr_destructor(void const*, char const*, void ()(void))::'lambda'(_object*)::operator()(_object*) const in simple_ml_ext-629c88.o
...

Also, when I tried doing "/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/pybind11/include/pybind11/pybind11.h" in the terminal I got "permission denied".

How do I fix this?

Thank you,
Sofia

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant