You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hi,
I wonder if methyldackel trim reads before or after softclip reads?
e.g. if i desired to trim 5bp each side for every read with --nOT 5,5,5,5
for a read with CIGAR string 5S1146M or 146M5S, is it 5 bp trimmed (only the soft clipped bases) or actually 10 base will be trimmed (5soft clip + 5 trimmed)?
Thanks much!!
The text was updated successfully, but these errors were encountered:
Hi,
I wonder if methyldackel trim reads before or after softclip reads?
e.g. if i desired to trim 5bp each side for every read with --nOT 5,5,5,5
for a read with CIGAR string 5S1146M or 146M5S, is it 5 bp trimmed (only the soft clipped bases) or actually 10 base will be trimmed (5soft clip + 5 trimmed)?
Thanks much!!
The text was updated successfully, but these errors were encountered: