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r-rintaros

r-rintaros is an Anaconda package which provides RIntaros package. RIntaros is an R package which provides high level geostatistical functions relying on RGeostats package for the INTAROS project context. More information for the RGeostats package are available here: http://cg.ensmp.fr/rgeostats

License

  • GPL v3

Quick link

Installation

sudo yum install -y glibc-2.14 miniconda
sudo conda update -y conda
  • Install the R package:
sudo conda install r-rintaros

Testing

  • Type:
LD_LIBRARY_PATH=/opt/glibc-2.14/lib:${LD_LIBRARY_PATH} /opt/anaconda/bin/R -e "library('RIntaros')"

Upgrade

To upgrade this package to newer version of RIntaros proceed as follows:

  • Login on a Ellip Workflows VM,
  • Install the required dependencies:
sudo yum install -y glibc-2.14 miniconda
sudo conda update -y conda
sudo conda install -y conda-build
  • Clone the repo:
git clone https://github.com/ec-intaros/r-rintaros.git
cd r-rintaros/conda.recipe
git checkout develop
  • Edit the meta.yaml file to update the following information:
version (first line)
sha256
  • Build the package with:
sudo conda build . --no-test

Local Test

  • Perform a local test:
sudo conda install -y --use-local r-rintaros
LD_LIBRARY_PATH=/opt/glibc-2.14/lib:${LD_LIBRARY_PATH} /opt/anaconda/bin/R -e "library('RIntaros')"

Release and deployment to production

  • Commit and push the local changes to the remote repository:
git commit -am "Set new version"

git flow init -d
export GIT_MERGE_AUTOEDIT=no
  • Perform the release:
version=<your version number>
git flow release start ${version}
git flow release finish -m "${version}" ${version}
  • Push the changes on the remote repository
git config --global push.default matching
git push && git push --tags

The command git push triggers a build process on https://build.terradue.com, which produces an Anaconda package for the new version and stores it under https://anaconda.org/Terradue/r-rintaros.