Failure in atlas_test_trans

[DJDavies2]

What happened?

Ctest atlas_test_trans fails like so:

Read rspecg
read_rspecg ...
read_rspecg ... done

[1] =========================================
[1] Segmentation fault (signal intercepted by atlas)
[1] -----------------------------------------
[1] BACKTRACE
[1] -----------------------------------------
[1] backtrace [1] stack has 15 addresses
[1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_base__spice_gnu/lib/libeckit.so+eckit::BackTrace::dumpabi:cxx11)0x172
[1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_base__spice_gnu/lib/libatlas.so.0.37+atlas::backtraceabi:cxx11)0xa
[1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_base__spice_gnu/lib/libatlas.so.0.37+atlas::library::atlas_signal_handler(int, siginfo_t*, void*))0x213
[1] (/usr/lib64/libpthread.so.0+)0xf630
[1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_base__spice_gnu/lib/../lib64/libectrans_dp.so+dist_spec_dp_)0x1f4c
[1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_base__spice_gnu/lib/libtransi_dp.so+trans_distspec)0x4b3
[1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_base__spice_gnu/lib/libatlas.so.0.37+atlas::trans::TransIFS::distspec(int, int const*, double const*, double*) const)0x73

What are the steps to reproduce the bug?

I am compiling against head of develop for ectrans, fiat, eckit and fckit and using gnu compiler.

Version

develop

Platform (OS and architecture)

Linux

Relevant log output

No response

Accompanying data

No response

Organisation

No response

[DJDavies2]

I think this ectrans branch fixes the issue:

https://github.com/DJDavies2/ectrans/tree/bugfix/95

There is only one change, removing a CONTIGUOUS attribute from a variable. However I don't know whether this change would be accepted in ectrans.